RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-204	ENST00000555890	CAPN3	P20807	821 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	JAK1	P23458	1154 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	CXCR2	P25025	360 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	HTR1B	P28222	390 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	MAT2A	P31153	395 aa	Known RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	VHL	P40337	213 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	ECI1	P42126	302 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	DGKE	P52429	567 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	THOP1	P52888	689 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	CLNS1A	P54105	237 aa	Known RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	KIAA1024L	P59773	190 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TBPL1	P62380	186 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	PHEX	P78562	749 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	HMGCS1	Q01581	520 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	DMPK	Q09013	629 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	CEACAM7	Q14002	265 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	CCNI	Q14094	377 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	FLOT2	Q14254	428 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TRIM25	Q14258	630 aa	Known RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	FGL2	Q14314	439 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	KRT33B	Q14525	404 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	GFOD2	Q3B7J2	385 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	THEMIS2	Q5TEJ8	643 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	FAM219B	Q5XKK7	198 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	MED27	Q6P2C8	311 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	ZFP1	Q6P2D0	407 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	LCTL	Q6UWM7	567 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	USP53	Q70EK8	1073 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	CHST15	Q7LFX5	561 aa	Predicted RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	FAM124A	Q86V42	546 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TRIM69	Q86WT6	500 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TBC1D21	Q8IYX1	336 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	LIX1	Q8N485	282 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	ZNF248	Q8NDW4	579 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	DENND6B	Q8NEG7	585 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	OR2T34	Q8NGX1	318 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	PROKR1	Q8TCW9	393 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	RNF141	Q8WVD5	230 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	EDARADD	Q8WWZ3	215 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	RLN3	Q8WXF3	142 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	LRRC58	Q96CX6	371 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	ASB9	Q96DX5	294 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	WDR34	Q96EX3	536 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	MRGPRX1	Q96LB2	322 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	HBEGF	Q99075	208 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	GTPBP2	Q9BX10	602 aa	Known RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	KRTAP9-2	Q9BYQ4	174 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	ACPT	Q9BZG2	426 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TRIM15	Q9C019	465 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	BTBD1	Q9H0C5	482 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	PCBD2	Q9H0N5	130 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	SLC6A17	Q9H1V8	727 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	VCX3B	Q9H321	246 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	EHD1	Q9H4M9	534 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	BRF2	Q9HAW0	419 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	IL1RL2	Q9HB29	575 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	CCDC177	Q9NQR7	707 aa	Predicted RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	FARSB	Q9NSD9	589 aa	Known RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	SPATA7	Q9P0W8	599 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TMEM181	Q9P2C4	612 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	GULP1	Q9UBP9	304 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	SLC23A2	Q9UGH3	650 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	MOSPD1	Q9UJG1	213 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	SLC17A4	Q9Y2C5	497 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	AP3M1	Q9Y2T2	418 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TDRKH	Q9Y2W6	561 aa	Known RBP	6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	PCDHA9	Q9Y5H5	950 aa		6.53	□□□□□ -1.36
SLIRP-204	ENST00000555890	TCRBV21S2A2	A0A5A6	115 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890		E7EQ34	232 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	TOR1B	O14657	336 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	BCAS2	O75934	225 aa	Predicted RBP	6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	CEACAM5	P06731	702 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	PCNA	P12004	261 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	BCKDHA	P12694	445 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	ACP5	P13686	325 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	XRCC1	P18887	633 aa	Predicted RBP	6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	AKT2	P31751	481 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	CLCNKA	P51800	687 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	SLC7A2	P52569	658 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	CLDN8	P56748	225 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	EEFSEC	P57772	596 aa	Known RBP	6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	SESN3	P58005	492 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	YPEL5	P62699	121 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	TAP2	Q03519	686 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	ACSM2A	Q08AH3	577 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	FAP	Q12884	760 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	BNIP2	Q12982	314 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	E2F2	Q14209	437 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	CYP2A13	Q16696	494 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	TIGD2	Q4W5G0	525 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	USP39	Q53GS9	565 aa	Known RBP	6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	PYCR3	Q53H96	274 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	PRAMEF14	Q5SWL7	426 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	ATG9B	Q674R7	924 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	ACSM2B	Q68CK6	577 aa		6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	CAPRIN2	Q6IMN6	1127 aa	Known RBP	6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	C8orf82	Q6P1X6	216 aa	Predicted RBP	6.52	□□□□□ -1.37
SLIRP-204	ENST00000555890	LRRC74B	Q6ZQY2	392 aa		6.52	□□□□□ -1.37

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