RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RAB38P57729 211 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 OCA2Q04671 838 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 SRSF11Q05519 484 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 C2orf80Q0P641 193 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 STX5Q13190 355 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 DSG2Q14126 1118 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 UBAP2LQ14157 1087 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 KIAA0040Q15053 153 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 AGKQ53H12 422 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 MFSD4BQ5TF39 518 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CCDC121Q6ZUS5 278 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CPSF7Q8N684 471 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 PCYOX1LQ8NBM8 494 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 CLHC1Q8NHS4 586 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 C16orf78Q8WTQ4 265 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 ADAMTS14Q8WXS8 1223 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 KLHL29Q96CT2 875 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 C10orf90Q96M02 699 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 OR1F2PQ96R84 312 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 SORBS1Q9BX66 1292 aaKnown RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 SPRTNQ9H040 489 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-220ENST00000555634 REEP4Q9H6H4 257 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF304Q9HCX3 659 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 PRDM7Q9NQW5 492 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 C14orf105Q9NVL8 296 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.61□□□□□ -0.716e-6■■□□□ 12.1
SHMT2-220ENST00000555634 OCIAD1Q9NX40 245 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 NDE1Q9NXR1 346 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 EHD3Q9NZN3 535 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 FBXW2Q9UKT8 454 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 PCDHGB4Q9UN71 923 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 DLGAP4Q9Y2H0 992 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 PADI2Q9Y2J8 665 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 MAP4K5Q9Y4K4 846 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 GPR45Q9Y5Y3 372 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF780BQ9Y6R6 833 aa10.61□□□□□ -0.71
SHMT2-220ENST00000555634 RIF1Q5UIP0 2472 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 SGK494L7N484 410 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 AKAP10O43572 662 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 DYRK3O43781 588 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 EEDO75530 441 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 DKK1O94907 266 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 LRATO95237 230 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 CCNYL3P0C7X3 344 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 DDCP20711 480 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 PIK3R1P27986 724 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 PRDX6P30041 224 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 RASSF2P50749 326 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 POLR2JP52435 117 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 LIM2P55344 173 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 C21orf58P58505 322 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 RAE1P78406 368 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 DCDP81605 110 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 SHC2P98077 582 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 KLF10Q13118 480 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 CYLC2Q14093 348 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 RCAN2Q14206 197 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 PGS1Q32NB8 556 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 CPTPQ5TA50 214 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 NDUFAF5Q5TEU4 345 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 ANXA8L1Q5VT79 327 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 FAM219BQ5XKK7 198 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 PWWP2BQ6NUJ5 590 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 MSANTD1Q6ZTZ1 278 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 METTL27Q8N6F8 245 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 BMPERQ8N8U9 685 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 TSPEARQ8WU66 669 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 TESCQ96BS2 214 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF764Q96H86 408 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 CTRCQ99895 268 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 RPF2Q9H7B2 306 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 MKKSQ9NPJ1 570 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 FAM120CQ9NX05 1096 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 SH3BP4Q9P0V3 963 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 HCN3Q9P1Z3 774 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 ARMCX1Q9P291 453 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 IFT80Q9P2H3 777 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 DHCR7Q9UBM7 475 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 TRPC4Q9UBN4 977 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF282Q9UDV7 671 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 NXT1Q9UKK6 140 aaKnown RBP10.6□□□□□ -0.71
SHMT2-220ENST00000555634 DAPP1Q9UN19 280 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 SATB2Q9UPW6 733 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 GVINP1Q7Z2Y8 2422 aa10.6□□□□□ -0.71
SHMT2-220ENST00000555634 SCN2AQ99250 2005 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 CCT8L1PA6NM43 557 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 CASC3O15234 703 aaKnown RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 NVLO15381 856 aaKnown RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 PDPK1O15530 556 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 HCRTR1O43613 425 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 TMPRSS11DO60235 418 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ATP5HO75947 161 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ANP32DO95626 131 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 AIFM1O95831 613 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 SNRPB2P08579 225 aaKnown RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ESRRAP11474 423 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 CALB2P22676 271 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms