RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 LINC01465Q8N7H1 131 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 LRRC57Q8N9N7 239 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 ABHD11Q8NFV4 315 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 CDC26Q8NHZ8 85 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 TRMT10AQ8TBZ6 339 aaKnown RBP3.58□□□□□ -1.84
KTN1-220ENST00000555172 ACMSDQ8TDX5 336 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 UBTD2Q8WUN7 234 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 SUSD6Q92537 303 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 HAS1Q92839 578 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 COQ8BQ96D53 544 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 ZNF419Q96HQ0 510 aaPredicted RBP3.58□□□□□ -1.84
KTN1-220ENST00000555172 Q96MF0 132 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 VPS35Q96QK1 796 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 MACROD1Q9BQ69 325 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 TEKT3Q9BXF9 490 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 OR2AG1Q9H205 316 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 SLA2Q9H6Q3 261 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 UBTD1Q9HAC8 227 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 LRRC4Q9HBW1 653 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 PKD2L2Q9NZM6 624 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 VPS54Q9P1Q0 977 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
KTN1-220ENST00000555172 LCMT1Q9UIC8 334 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 LRP12Q9Y561 859 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 SIRT4Q9Y6E7 314 aaPredicted RBP3.58□□□□□ -1.84
KTN1-220ENST00000555172 RNF215Q9Y6U7 377 aa3.58□□□□□ -1.84
KTN1-220ENST00000555172 TRAV26-1A0A087WT03 109 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CENPVL1A0A0U1RR11 272 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 A0A1B0GVL5 298 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 FAM240BA0A1B0GVZ2 78 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 IQCF5A8MTL0 148 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TARM1B6A8C7 271 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PRR23D1E9PI22 279 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 PPIAL4DF5H284 164 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 F8VVB4 439 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 F8VWA3 439 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZNF701M0R085 212 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 CCL24O00175 119 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 EEF2KO00418 725 aaKnown RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZNF197O14709 1029 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 OR1F1O43749 312 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 NME2P1O60361 137 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 SDC3O75056 442 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CLPTM1O96005 669 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PRR23D2P0DMB1 279 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 HAPLN1P10915 354 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 ST6GAL1P15907 406 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 NDUFB7P17568 137 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZNF10P21506 573 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 LMO1P25800 156 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZFP36P26651 326 aaKnown RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 NAMPTP43490 491 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PGGT1BP53609 377 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 SSTP61278 116 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PPIAP62937 165 aaKnown RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 DMPKQ09013 629 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PMPCAQ10713 525 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PNRC1Q12796 327 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 MERTKQ12866 999 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ITGB3BPQ13352 177 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 NFATC2Q13469 925 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 NONOQ15233 471 aaKnown RBP eCLIP3.57□□□□□ -1.84
KTN1-220ENST00000555172 STX1AQ16623 288 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TEX44Q53QW1 395 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 KIAA1755Q5JYT7 1200 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 MLIPQ5VWP3 458 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PLCXD3Q63HM9 321 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 UGT3A1Q6NUS8 523 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CEP85Q6P2H3 762 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 KCNIP4Q6PIL6 250 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TRIM65Q6PJ69 517 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 KCTD8Q6ZWB6 473 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TRPM8Q7Z2W7 1104 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 LUZP2Q86TE4 346 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 VRK2Q86Y07 508 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CCDC60Q8IWA6 550 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 BMPERQ8N8U9 685 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZNF397Q8NF99 534 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 OR13F1Q8NGS4 319 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CD300LFQ8TDQ1 290 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 SSMEM1Q8WWF3 244 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ASB10Q8WXI3 467 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TFAP2BQ92481 460 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 PIGCQ92535 297 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TOP1MTQ969P6 601 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 LRRC45Q96CN5 670 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 FAM71F1Q96KD3 344 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 CXorf58Q96LI9 332 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZNF570Q96NI8 536 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CYTH2Q99418 400 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CBWD1Q9BRT8 395 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 TMEM79Q9BSE2 394 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 WRAP53Q9BUR4 548 aaKnown RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 SEMA6AQ9H2E6 1030 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CYSLTR2Q9NS75 346 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 ZNF275Q9NSD4 429 aaPredicted RBP3.57□□□□□ -1.84
KTN1-220ENST00000555172 KLHL28Q9NXS3 571 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 HACD3Q9P035 362 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 P2RX2Q9UBL9 471 aa3.57□□□□□ -1.84
KTN1-220ENST00000555172 CDH9Q9ULB4 789 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms