RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NSG1A0A0A6YYJ2 146 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ARHGAP10A1A4S6 786 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 A8MUA0 341 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 PYCARD-AS1I3L0S3 204 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 FOXE1O00358 373 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 MANBAO00462 879 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 TYROBPO43914 113 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ITGAMP11215 1152 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 SERPINB1P30740 379 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ALDH3A1P30838 453 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ARRB2P32121 409 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 DNAJB13P59910 316 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ID2Q02363 134 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 LCP2Q13094 533 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 AIMP2Q13155 320 aaKnown RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 MPP2Q14168 576 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 MYBPC3Q14896 1274 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 NSDHLQ15738 373 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 TMEM35AQ53FP2 167 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 SFT2D3Q587I9 215 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 TNFAIP8L3Q5GJ75 292 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 CES4AQ5XG92 561 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 C18orf63Q68DL7 685 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 TTC19Q6DKK2 380 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 OR4C11Q6IEV9 310 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 RIPOR1Q6ZS17 1223 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 FRMD7Q6ZUT3 714 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 GPRIN3Q6ZVF9 776 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ASB18Q6ZVZ8 466 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 CHSY3Q70JA7 882 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 EXOC3L1Q86VI1 746 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 SCUBE1Q8IWY4 988 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 CLEC1AQ8NC01 280 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 METTL21AQ8WXB1 218 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 RGMAQ96B86 450 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 NACC2Q96BF6 587 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 THOC3Q96J01 351 aaKnown RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 PTCHD1Q96NR3 888 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 NPLQ9BXD5 320 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 MRPL1Q9BYD6 325 aaKnown RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 ADGRE2Q9UHX3 823 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 FBXW2Q9UKT8 454 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 PCDHGA9Q9Y5G4 932 aaKnown RBP11.6□□□□□ -0.55
SYNE2-214ENST00000554928 CSAG2Q9Y5P2 127 aa11.6□□□□□ -0.55
SYNE2-214ENST00000554928 SCN2AQ99250 2005 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 A0A0A6YYD5 115 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 CCDC151A5D8V7 595 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 EIF4E1BA6NMX2 242 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PSMD12O00232 456 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PRMT3O60678 531 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 TUBBP07437 444 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PRR35P0CG20 571 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 IL10P22301 178 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PTX3P26022 381 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SERPINB3P29508 390 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PGDP52209 483 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 RAP1GDS1P52306 607 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SOX8P57073 446 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 OR4D2P58180 307 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SKP1P63208 163 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 IFT88Q13099 833 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SLAMF1Q13291 335 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 AP5B1Q2VPB7 878 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 NADK2Q4G0N4 442 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 B3GNTL1Q67FW5 361 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 MRM1Q6IN84 353 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 NIPAL1Q6NVV3 410 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PAPD4Q6PIY7 484 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 QSOX2Q6ZRP7 698 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 ZCCHC23Q6ZST2 131 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 OR4N5Q8IXE1 308 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 RBMXL3Q8N7X1 1067 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 RDH11Q8TC12 318 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SELENOMQ8WWX9 145 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 REPS1Q96D71 796 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SMC6Q96SB8 1091 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 SMAD5Q99717 465 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 CENPHQ9H3R5 247 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 ELOVL6Q9H5J4 265 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 CLK4Q9HAZ1 481 aaKnown RBP11.59□□□□□ -0.55
SYNE2-214ENST00000554928 MID1IP1Q9NPA3 183 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PRDM9Q9NQV7 894 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 PRTFDC1Q9NRG1 225 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 LUZP4Q9P127 313 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 ATG4BQ9Y4P1 393 aa11.59□□□□□ -0.55
SYNE2-214ENST00000554928 A0A1W2PR48 441 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 A0A1W2PS29 197 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 TCRBV16S1A1N1A0A5B0 115 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 MAN1A2O60476 641 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 LDB3O75112 727 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 ESRRBO95718 433 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 MLYCDO95822 493 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 CHRNGP07510 517 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 JAK1P23458 1154 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 TPP2P29144 1249 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 ETV4P43268 484 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms