RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CLDN16Q9Y5I7 305 aa7.06□□□□□ -1.28
LINC00640-201ENST00000554409 COPG1Q9Y678 874 aaKnown RBP7.06□□□□□ -1.28
LINC00640-201ENST00000554409 TRAV17A0A0B4J275 112 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 A0A0G2JN53 185 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 BLACEA4D250 179 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 OR5H15A6NDH6 313 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 LRRC14BA6NHZ5 514 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 FAM227AF5H4B4 570 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CYR61O00622 381 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CLDN4O14493 209 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CBX6O95503 412 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 WDPCPO95876 746 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 UQCRHP07919 91 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 FAM153BP0C7A2 387 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PCNAP12004 261 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 MAOAP21397 527 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 GNLYP22749 145 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ATP5A1P25705 553 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CERS1P27544 350 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 TNFRSF8P28908 595 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 EEF1DP29692 281 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PLA2G16P53816 162 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 LIM2P55344 173 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 TAS2R50P59544 299 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PHEXP78562 749 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF33BQ06732 778 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ACTN3Q08043 901 aaPredicted RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 GTF2H2Q13888 395 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 UBAP2LQ14157 1087 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 MEP1AQ16819 746 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 FAM153CQ494X1 144 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ABHD17BQ5VST6 288 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 KHDRBS2Q5VWX1 349 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 GTF2H2CQ6P1K8 395 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CHSY3Q70JA7 882 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 GOLGA7Q7Z5G4 137 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF595Q8IYB9 648 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ARMC10Q8N2F6 343 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 TMEM151AQ8N4L1 468 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 FAM26EQ8N5C1 309 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 SLC5A8Q8N695 610 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 AMER2Q8N7J2 671 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PTGR2Q8N8N7 351 aaPredicted RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CATSPER1Q8NEC5 780 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 NFAM1Q8NET5 270 aaPredicted RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 OR1N1Q8NGS0 311 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 UHMK1Q8TAS1 419 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 REPS1Q96D71 796 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 C19orf60Q96EN9 201 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 F2RL3Q96RI0 385 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 NPAS2Q99743 824 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 MRPL57Q9BQC6 102 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 NTMT1Q9BV86 223 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 C1QTNF3Q9BXJ4 246 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 MRPL46Q9H2W6 279 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 EPB41L4BQ9H329 900 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 IPPKQ9H8X2 491 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ACTR8Q9H981 624 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 KCNK13Q9HB14 408 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 DMRT3Q9NQL9 472 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 NECTIN3Q9NQS3 549 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PRTFDC1Q9NRG1 225 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 AGPAT4Q9NRZ5 378 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 STMN3Q9NZ72 180 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 KCMF1Q9P0J7 381 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 ABI3Q9P2A4 366 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 CPSF2Q9P2I0 782 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 XPR1Q9UBH6 696 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PCTPQ9UKL6 214 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PPT2Q9UMR5 302 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 NTNG1Q9Y2I2 539 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 PCDHGB6Q9Y5F9 930 aa7.05□□□□□ -1.28
LINC00640-201ENST00000554409 SPENQ96T58 3664 aaKnown RBP7.05□□□□□ -1.28
LINC00640-201ENST00000554409 IQANK1A0A1B0GTG1 560 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 TGFBR3LH3BV60 316 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 FOXE1O00358 373 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 OR7A17O14581 309 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 PRAMEF2O60811 474 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 CTNSO60931 367 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SMIM24O75264 130 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SIX3O95343 332 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 CLDN9O95484 217 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 TGFB1P01137 390 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 RPS17P08708 135 aaKnown RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SBK3P0C264 359 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 MYBL2P10244 700 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 HIST1H1TP22492 207 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 HNRNPFP52597 415 aaKnown RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 SLC29A2Q14542 456 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 AP5B1Q2VPB7 878 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 GGTA1PQ4G0N0 100 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ACER2Q5QJU3 275 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 C10orf62Q5T681 223 aaPredicted RBP7.04□□□□□ -1.28
LINC00640-201ENST00000554409 DEPDC1Q5TB30 811 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 OR4C11Q6IEV9 310 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 ZNF793Q6ZN11 406 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 CRLF3Q8IUI8 442 aa7.04□□□□□ -1.28
LINC00640-201ENST00000554409 BEST3Q8N1M1 668 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms