RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ESRRBO95718 433 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 F10P00742 488 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 CDH1P12830 882 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 FBLP22087 321 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 CCNG1P51959 295 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 SEC24CP53992 1094 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 FOXA1P55317 472 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 PKNOX1P55347 436 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 VWA2Q5GFL6 755 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 GFRALQ6UXV0 394 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 GPRIN3Q6ZVF9 776 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 L3MBTL4Q8NA19 623 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 ABHD11Q8NFV4 315 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 OR4F6Q8NGB9 312 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 BRIX1Q8TDN6 353 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 SLC5A11Q8WWX8 675 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 KCNA7Q96RP8 456 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 YIPF2Q9BWQ6 316 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 SPNS1Q9H2V7 528 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 FGFR1OP2Q9NVK5 253 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 PNPOQ9NVS9 261 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 RNF11Q9Y3C5 154 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 RAP2CQ9Y3L5 183 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 DYRK1BQ9Y463 629 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 KCNE2Q9Y6J6 123 aa13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 DIDO1Q9BTC0 2240 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-202ENST00000554365 LOC105369274A0A096LPK9 316 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TRAV17A0A0B4J275 112 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TRGV8A0A0C4DH27 118 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 LOC102723532A0A0G2JNH3 316 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 PCDH17O14917 1159 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 NRP2O60462 931 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 SNUPNO95149 360 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 FKBP9O95302 570 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 OTCP00480 354 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 FGF4P08620 206 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 PRR35P0CG20 571 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 C1GALT1C1LP0DN25 315 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 GNAZP19086 355 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 DRD4P21917 467 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 CXCR2P25025 360 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 GRNP28799 593 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TDGF1P3P51864 188 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 ABATP80404 500 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 EEF1A2Q05639 463 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 CHIT1Q13231 466 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 DOC2AQ14183 400 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TBCCQ15814 346 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 UGT3A2Q3SY77 523 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 GGTA1PQ4G0N0 100 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 THEMIS2Q5TEJ8 643 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 KANK2Q63ZY3 851 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 ATG9BQ674R7 924 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 ZNF425Q6IV72 752 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 PRMT9Q6P2P2 845 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 NDUFAF7Q7L592 441 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 LAPTM4BQ86VI4 370 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 C17orf64Q86WR6 236 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 OR4N4Q8N0Y3 316 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 OR4K1Q8NGD4 311 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 NR4A3Q92570 626 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 RELTQ969Z4 430 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 CHMP6Q96FZ7 201 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TAAR6Q96RI8 345 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 EHD1Q9H4M9 534 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 PELI2Q9HAT8 420 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 EML4Q9HC35 981 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 ENAMQ9NRM1 1142 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 SUCOQ9UBS9 1254 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 STK38LQ9Y2H1 464 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 KLK4Q9Y5K2 254 aa13.22□□□□□ -0.29
SPTLC2-202ENST00000554365 ZNF195O14628 629 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 FFAR3O14843 346 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 CLGNO14967 610 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 GPR42O15529 346 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 UGDHO60701 494 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 CLDN9O95484 217 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 VIMP08670 466 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 COX6A1P12074 109 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 SOX11P35716 441 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 TNFSF10P50591 281 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 EMP2P54851 167 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 CSNK1G2P78368 415 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 REEP5Q00765 189 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 IRF8Q02556 426 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 MUM1Q2TAK8 710 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 TCHHL1Q5QJ38 904 aaPredicted RBP13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 SH2D4BQ5SQS7 431 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 LIPJQ5W064 366 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 ZNF324BQ6AW86 544 aaPredicted RBP13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 CLEC6AQ6EIG7 209 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 FAAH2Q6GMR7 532 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 GRHL2Q6ISB3 625 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms