RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 OTCP00480 354 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 HPP00738 406 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 SHBGP04278 402 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 FHP07954 510 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 MYL2P10916 166 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 MTHFD2P13995 350 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 ATP5F1P24539 256 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 DEKP35659 375 aaKnown RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CSRP3P50461 194 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 PLA2G16P53816 162 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 MTTPP55157 894 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 NAA20P61599 178 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 ASPHQ12797 758 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 IFT88Q13099 833 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 RASA2Q15283 850 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 SYT16Q17RD7 645 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CCDC153Q494R4 210 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 TMEM35AQ53FP2 167 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 C10orf62Q5T681 223 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 FAM69BQ5VUD6 431 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CPZQ66K79 652 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 FAAH2Q6GMR7 532 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 TCTN3Q6NUS6 607 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 C20orf204Q6ZNR8 217 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 NDUFAF7Q7L592 441 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 GOLGA7Q7Z5G4 137 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 PPP1R32Q7Z5V6 425 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 MILR1Q7Z6M3 343 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CROCCP2Q86T23 111 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 KBTBD2Q8IY47 623 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 GALNT16Q8N428 558 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 AFAP1L2Q8N4X5 818 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 AMER3Q8N944 861 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 OR2L5Q8NG80 312 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 UTP15Q8TED0 518 aaKnown RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 CAVIN3Q969G5 261 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 TBC1D20Q96BZ9 403 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 MOCOSQ96EN8 888 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 PLPPR2Q96GM1 343 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 PEX11GQ96HA9 241 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 BBC3Q96PG8 261 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 KCNC2Q96PR1 638 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 SERINC2Q96SA4 455 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 TBCDQ9BTW9 1192 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 NPLQ9BXD5 320 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 PARD6BQ9BYG5 372 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 SPNS1Q9H2V7 528 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 ELOVL6Q9H5J4 265 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 EPS8L2Q9H6S3 715 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 NOL11Q9H8H0 719 aaKnown RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 NMRK1Q9NWW6 199 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 COPG2Q9UBF2 871 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 GDF2Q9UK05 429 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 PCDHGA9Q9Y5G4 932 aaKnown RBP7.87□□□□□ -1.15
PSEN1-209ENST00000553855 HS3ST3B1Q9Y662 390 aa7.87□□□□□ -1.15
PSEN1-209ENST00000553855 GCN1Q92616 2671 aaKnown RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 LRIT2A6NDA9 550 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 A8MT66 165 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 B8ZZF3 427 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 CHST10O43529 356 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 B4GALT2O60909 372 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 CRCPO75575 148 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 DNAJB5O75953 348 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SIX3O95343 332 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 MLYCDO95822 493 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 TGFB1P01137 390 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 NUDT17P0C025 328 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 MYZAPP0CAP1 466 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 KRT4P19013 534 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 PTX3P26022 381 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 GCAP28676 217 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 TLX1P31314 330 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 PIK3CBP42338 1070 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SSR2P43308 183 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SRSF11Q05519 484 aaKnown RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 EEF1A2Q05639 463 aaKnown RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 KLRB1Q12918 225 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 MYBPC3Q14896 1274 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 NSDHLQ15738 373 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 CFAP157Q5JU67 520 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 VWA5B1Q5TIE3 1220 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 AGAP7PQ5VUJ5 663 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 LRFN4Q6PJG9 635 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 KIRREL2Q6UWL6 708 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 PRSS41Q7RTY9 318 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 HDXQ7Z353 690 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 CPEB2Q7Z5Q1 589 aaKnown RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 ZC3H7AQ8IWR0 971 aaKnown RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 LAS2Q8IYD9 372 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 ZADH2Q8N4Q0 377 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 ARHGEF39Q8N4T4 335 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 DTWD1Q8N5C7 304 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 OR7G3Q8NG95 312 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 RDH11Q8TC12 318 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 CREB3L4Q8TEY5 395 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 AENQ8WTP8 325 aaKnown RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 RGMAQ96B86 450 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 MS4A6EQ96DS6 147 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms