RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 XKRXQ6PP77 449 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CCDC149Q6ZUS6 474 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ZNF767PQ75MW2 155 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 DGLUCYQ7Z3D6 616 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 APH1BQ8WW43 257 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 IRF7Q92985 503 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 FAM120BQ96EK7 910 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 MRGPRX3Q96LB0 322 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 APOLD1Q96LR9 279 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ZSWIM3Q96MP5 696 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 HHIPQ96QV1 700 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 RAD9AQ99638 391 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 KCNS3Q9BQ31 491 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 EBPLQ9BY08 206 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ROGDIQ9GZN7 287 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 NUFIP1Q9UHK0 495 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 SAMD4AQ9UPU9 718 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 MAN2B2Q9Y2E5 1009 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 KLHL20Q9Y2M5 609 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 A0A0X1KG70 313 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CXorf51AA0A1B0GTR3 108 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 WASH3PC4AMC7 463 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ZNF254O75437 659 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 MPC1LP0DKB6 136 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 TIMP2P16035 220 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 AMD1P17707 334 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 TIMM50Q3ZCQ8 353 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ADNP2Q6IQ32 1131 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CCDC71Q8IV32 467 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 GPR65Q8IYL9 337 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ENTHD1Q8IYW4 607 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CYP4Z2PQ8N1L4 340 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 ATG16L2Q8NAA4 619 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 DNAJB8Q8NHS0 232 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 CRELD1Q96HD1 420 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 FYTTD1Q96QD9 318 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 TM9SF2Q99805 663 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 RIOK2Q9BVS4 552 aaKnown RBP11.74□□□□□ -0.53
SHMT2-207ENST00000553837 SLC22A4Q9H015 551 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 KCNH6Q9H252 994 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 FAM83DQ9H4H8 585 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 SERHL2Q9H4I8 314 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 NARFLQ9H6Q4 476 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 PRDM8Q9NQV8 689 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 SAGE1Q9NXZ1 904 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 SNX7Q9UNH6 387 aa11.74□□□□□ -0.53
SHMT2-207ENST00000553837 PLXNA2O75051 1894 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 MYO7AQ13402 2215 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 OR6C70A6NIJ9 312 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 CLCA1A8K7I4 914 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 ARHGEF33A8MVX0 844 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 TFECO14948 347 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-207ENST00000553837 KIAA0513O60268 411 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 HIST1H2AGP0C0S8 130 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-207ENST00000553837 HIST1H2ADP20671 130 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 PRPH2P23942 346 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 S100A3P33764 101 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 ETV1P50549 477 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 CTSCP53634 463 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 FAPQ12884 760 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 ABRQ12979 859 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 CHIT1Q13231 466 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 SLAMF1Q13291 335 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 SOWAHCQ53LP3 525 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-207ENST00000553837 PLEKHS1Q5SXH7 462 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 OR4F3Q6IEY1 312 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 TCTE3Q8IZS6 198 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 CMTM7Q96FZ5 175 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 HIST1H2AHQ96KK5 128 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 HIST1H2AJQ99878 128 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 H2AFJQ9BTM1 129 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 IL1RAPQ9NPH3 570 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 SPHK2Q9NRA0 654 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 DNAJC11Q9NVH1 559 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 SPASTQ9UBP0 616 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 WNT6Q9Y6F9 365 aa11.73□□□□□ -0.53
SHMT2-207ENST00000553837 NUP214P35658 2090 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-207ENST00000553837 YY2O15391 372 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 ERN1O75460 977 aaKnown RBP11.72□□□□□ -0.53
SHMT2-207ENST00000553837 EPN2O95208 641 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 TIMP1P01033 207 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 ALPPP05187 535 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 ADH1AP07327 375 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 EPHA2P29317 976 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 WEE1P30291 646 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 VIPR1P32241 457 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 PREPP48147 710 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 HNMTP50135 292 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 SCN1BQ07699 218 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 SHEQ5VZ18 495 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 FRG2Q64ET8 278 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 NOXRED1Q6NXP6 359 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 DEPDC4Q8N2C3 294 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 HRASLS5Q96KN8 279 aa11.72□□□□□ -0.53
SHMT2-207ENST00000553837 FRG2BQ96QU4 278 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms