RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RAB28P51157 221 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 PRELPP51888 382 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 CLDN17P56750 224 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 UBASH3AP57075 661 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 KRTAP10-1P60331 282 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 GCKRQ14397 625 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 SIX1Q15475 284 aaPredicted RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 KRT80Q6KB66 452 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 REG3GQ6UW15 175 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 MFN1Q8IWA4 741 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 SECISBP2LQ93073 1101 aaKnown RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 VMP1Q96GC9 406 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 LURAP1Q96LR2 239 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 NDNQ99608 321 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 LRRCC1Q9C099 1032 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 STRADBQ9C0K7 418 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 RIMS4Q9H426 269 aaPredicted RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 ABCB10Q9NRK6 738 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 MRGBPQ9NV56 204 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 POLKQ9UBT6 870 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 SLC12A6Q9UHW9 1150 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 MRPS18CQ9Y3D5 142 aaKnown RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 COLEC10Q9Y6Z7 277 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 PLCH1Q4KWH8 1693 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 GON4LQ3T8J9 2241 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 NEXMIFQ5QGS0 1516 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 E9PAM4 449 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 INPP4BO15327 924 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 TADA2AO75478 443 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PSMD10O75832 226 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 GGPS1O95749 300 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 HSPA4LO95757 839 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 KLK2P20151 261 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 LYZP61626 148 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 TRA2BP62995 288 aaKnown RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 ACY1Q03154 408 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 MLF2Q15773 248 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 CRY2Q49AN0 593 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 LACTB2Q53H82 288 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PRR30Q53SZ7 412 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 ODF2Q5BJF6 829 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 C1orf141Q5JVX7 400 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 C9orf66Q5T8R8 295 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 TTC27Q6P3X3 843 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 ENPP7Q6UWV6 458 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 CCDC91Q7Z6B0 441 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 AMIGO1Q86WK6 493 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 CARM1Q86X55 608 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 CD177Q8N6Q3 437 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 CCDC185Q8N715 623 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 XXYLT1Q8NBI6 393 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 KLHL30-AS1Q8NEE0 82 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 SSC4DQ8WTU2 575 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 LINC00615Q96LM1 132 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 RAB3IPQ96QF0 476 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 CCDC28BQ9BUN5 200 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 SLITRK2Q9H156 845 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 ARGLU1Q9NWB6 273 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PRO0461Q9UI25 63 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PILRAQ9UKJ1 303 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 POMT2Q9UKY4 750 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PLCL2Q9UPR0 1127 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 KLF2Q9Y5W3 355 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-210ENST00000553693 KIF25-AS1Q9Y6Z4 181 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 HFM1A2PYH4 1435 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 NAIPQ13075 1403 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 NWD2Q9ULI1 1742 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 NUP155O75694 1391 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PARD3Q8TEW0 1356 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 PLEKHH1Q9ULM0 1364 aa2.99□□□□□ -1.93
SCFD1-210ENST00000553693 THSD7AQ9UPZ6 1657 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 IQGAP3Q86VI3 1631 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 RTCAO00442 366 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 MAGEB2O15479 319 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 SPRY1O43609 319 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 LUC7L3O95232 432 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 STAG3L1P0CL83 205 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 MYBL1P10243 752 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 IL11P20809 199 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ACHEP22303 614 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 RPL34P49207 117 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ABCE1P61221 599 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 SULT2A1Q06520 285 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 RUNX3Q13761 415 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 COG2Q14746 738 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 TCP11X2Q5H9J9 407 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 SPANXN4Q5MJ08 99 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ATAD3CQ5T2N8 411 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ERMARDQ5T6L9 678 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 FUT10Q6P4F1 479 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 PET117Q6UWS5 81 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 RBPMS2Q6ZRY4 209 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 GALNTL5Q7Z4T8 443 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 THNSL1Q8IYQ7 743 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 PRSS35Q8N3Z0 413 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 SLC26A7Q8TE54 656 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 NXPE2Q96DL1 559 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 CFAP57Q96MR6 1250 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 SPATA33Q96N06 139 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 TAAR6Q96RI8 345 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms