RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 POLMQ9NP87 494 aaPredicted RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 IL1RAPQ9NPH3 570 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TRNAU1APQ9NX07 287 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 C5AR2Q9P296 337 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 APOBEC3BQ9UH17 382 aaKnown RBP10.95□□□□□ -0.66
RAB5C-208ENST00000551338 CYP8B1Q9UNU6 501 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 KLHL20Q9Y2M5 609 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 PCDHGA4Q9Y5G9 962 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 SNX11Q9Y5W9 270 aa10.95□□□□□ -0.66
RAB5C-208ENST00000551338 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TRIM64CA6NLI5 447 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TOR1BO14657 336 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 B4GALT2O60909 372 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 OR6B1O95007 311 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 DIRAS1O95057 198 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 KRT75O95678 551 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 CLPTM1O96005 669 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 OPN1SWP03999 348 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 CHRNB1P11230 501 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 ATP6V1B1P15313 513 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 AQP1P29972 269 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 GRK3P35626 688 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 CHI3L1P36222 383 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 ARFIP1P53367 373 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 PLA2G16P53816 162 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 PCBP4P57723 403 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 KCNJ10P78508 379 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 EIF2B5Q13144 721 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 SCARB2Q14108 478 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 COL13A1Q5TAT6 717 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TRIM40Q6P9F5 258 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 ABHD17CQ6PCB6 329 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 SHQ1Q6PI26 577 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TTC33Q6PID6 262 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 Q6ZSR6 202 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 CCDC80Q76M96 950 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 CEP68Q76N32 757 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TSEN54Q7Z6J9 526 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 HIPK1Q86Z02 1210 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 SLC22A18ASQ8N1D0 253 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TSPAN14Q8NG11 270 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 OR4E2Q8NGC2 313 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 ZFP28Q8NHY6 868 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 EXOSC8Q96B26 276 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TAMM41Q96BW9 452 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 NEURL3Q96EH8 262 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 C7orf34Q96L11 122 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 BARD1Q99728 777 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 RBM4BQ9BQ04 359 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 MACROD1Q9BQ69 325 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 C17orf62Q9BQA9 187 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 RBM4Q9BWF3 364 aaKnown RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TCEAL2Q9H3H9 227 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 PRDM7Q9NQW5 492 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 GPR27Q9NS67 375 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 OR6C2Q9NZP2 312 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 IFT80Q9P2H3 777 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TMEFF2Q9UIK5 374 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-208ENST00000551338 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 NINQ8N4C6 2090 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 THADAQ6YHU6 1953 aa10.94□□□□□ -0.66
RAB5C-208ENST00000551338 TRBV23OR9-2A0A075B6M9 112 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 SMIM31A0A1B0GVY4 71 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 CHURC1-FNTBB4DL54 471 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 PRAMEF26H0Y7S4 382 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ERI3O43414 337 aaKnown RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 E2F6O75461 281 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 TNFP01375 233 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 FPR1P21462 350 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 PAX7P23759 505 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 RABIFP47224 123 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ALDH3B2P48448 385 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 CDH15P55291 814 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 PCBP3P57721 371 aaKnown RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 DSTNP60981 165 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 CDK6Q00534 326 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 EPS8Q12929 822 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 KCNAB2Q13303 367 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ZNF630Q2M218 657 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 CNPY1Q3B7I2 92 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 VN1R4Q7Z5H5 301 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 TRIM73Q86UV7 250 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ZNF786Q8N393 782 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 TBC1D19Q8N5T2 526 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 OR2L5Q8NG80 312 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 TPD52L3Q96J77 140 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 NLNQ9BYT8 704 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 AMBRA1Q9C0C7 1298 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 RBM38Q9H0Z9 239 aaKnown RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 CLK4Q9HAZ1 481 aaKnown RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ACSS1Q9NUB1 689 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 ADPRHL2Q9NX46 363 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 WSB2Q9NYS7 404 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-208ENST00000551338 TAS2R7Q9NYW3 318 aa10.93□□□□□ -0.66
RAB5C-208ENST00000551338 SNX7Q9UNH6 387 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms