RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MORN4Q8NDC4 146 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 OR5L2Q8NGL0 311 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 RHEBL1Q8TAI7 183 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 FBXO25Q8TCJ0 367 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ITLN2Q8WWU7 325 aaPredicted RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCDC120Q96HB5 630 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 QRFPRQ96P65 431 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 TIMMDC1Q9NPL8 285 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 PNO1Q9NRX1 252 aaKnown RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 MS4A12Q9NXJ0 267 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 OPTCQ9UBM4 332 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 VTI1BQ9UEU0 232 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 FBXW2Q9UKT8 454 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF490Q9ULM2 529 aaPredicted RBP10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 DAPP1Q9UN19 280 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF835Q9Y2P0 537 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 ACOT9Q9Y305 439 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 SCN2AQ99250 2005 aa10.16□□□□□ -0.78
VTI1BP3-201ENST00000550220 TRBV11-1A0A0K0K1C0 115 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 K7EPI3 171 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 CYR61O00622 381 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 PRRG2O14669 202 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 DYRK3O43781 588 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 KERAO60938 352 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 ITGA10O75578 1167 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 PIAS1O75925 651 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 IFNA16P05015 189 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 COX7A2P14406 83 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 ABOP16442 354 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 EPB42P16452 691 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 PHBP35232 272 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 SSR4P51571 173 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 GPR143P51810 404 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 LIM2P55344 173 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 PHEXP78562 749 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 PMP22Q01453 160 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 C2orf54Q08AI8 447 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 BMPR2Q13873 1038 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 SLMAPQ14BN4 828 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 OR4D1Q15615 310 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 METTL2BQ6P1Q9 378 aaKnown RBP10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 MED27Q6P2C8 311 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 KLC3Q6P597 504 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 HSDL2Q6YN16 418 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 ZNF572Q7Z3I7 529 aaPredicted RBP10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 CCDC25Q86WR0 208 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 SIAH3Q8IW03 269 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 LAS2Q8IYD9 372 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 AMER2Q8N7J2 671 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 OR8K3Q8NH51 312 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 OR14A16Q8NHC5 309 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 FBF1Q8TES7 1133 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 MARVELD3Q96A59 401 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 REPS1Q96D71 796 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 CMTM7Q96FZ5 175 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 F2RL3Q96RI0 385 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 ALOXE3Q9BYJ1 711 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 UNKQ9C0B0 810 aaKnown RBP10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 AICDAQ9GZX7 198 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 ALG9Q9H6U8 611 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 PRDM7Q9NQW5 492 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 TSC22D4Q9Y3Q8 395 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 TNPO3Q9Y5L0 923 aaKnown RBP10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 SCN3AQ9NY46 2000 aa10.15□□□□□ -0.78
VTI1BP3-201ENST00000550220 A0A0G2JN53 185 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 A8MVJ9 347 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 SUPT3HB4E1H0 165 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 C4orf51C9J302 202 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 FANCGO15287 622 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PEX1O43933 1283 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 UGDHO60701 494 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 SUPT3HO75486 399 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 SCELO95171 688 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 C1QAP02745 245 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLC35E2BP0CK96 405 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 TNNI3P19429 210 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PPP2R1BP30154 601 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 TLX1P31314 330 aaPredicted RBP10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PIK3CBP42338 1070 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 MSH2P43246 934 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 GUCY2DQ02846 1103 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ACAP2Q15057 778 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 C3AR1Q16581 482 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF630Q2M218 657 aaPredicted RBP10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF468Q5VIY5 522 aaPredicted RBP10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 MYO7BQ6PIF6 2116 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PAOXQ6QHF9 649 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 SYT10Q6XYQ8 523 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 RGS9BPQ6ZS82 235 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 VN1R5Q7Z5H4 357 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 SULF2Q8IWU5 870 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 CYP4Z2PQ8N1L4 340 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ACOT4Q8N9L9 421 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 FAM47BQ8NA70 645 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 C16orf52Q8NHV5 167 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF473Q8WTR7 871 aaKnown RBP10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PHF10Q8WUB8 498 aaKnown RBP10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 UBTD2Q8WUN7 234 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 NCLNQ969V3 563 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms