RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CTAGE6Q86UF2 777 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 CCDC71Q8IV32 467 aaPredicted RBP12.61□□□□□ -0.39
TROAP-211ENST00000549891 FAM47BQ8NA70 645 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 MORN4Q8NDC4 146 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 C7orf57Q8NEG2 295 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 OR2L5Q8NG80 312 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 OR10Q1Q8NGQ4 319 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 OR14A16Q8NHC5 309 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 MS4A6EQ96DS6 147 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 VPS39Q96JC1 886 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 SERINC2Q96SA4 455 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 FAM173AQ9BQD7 235 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 TTTY12Q9BZ98 90 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 REXO4Q9GZR2 422 aaKnown RBP12.61□□□□□ -0.39
TROAP-211ENST00000549891 AICDAQ9GZX7 198 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 NT5DC2Q9H857 520 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 COPS7BQ9H9Q2 264 aaPredicted RBP12.61□□□□□ -0.39
TROAP-211ENST00000549891 DEPPQ9NTK1 212 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 SLC17A6Q9P2U8 582 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 ARHGAP21Q5T5U3 1957 aa12.61□□□□□ -0.39
TROAP-211ENST00000549891 A0A0G2JN53 185 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 TMEM200CA6NKL6 621 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 FAM166BA8MTA8 275 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 CDC7O00311 574 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 KLK8O60259 260 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 OR6B1O95007 311 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 CNR1P21554 472 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 PPP2R1BP30154 601 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 HNRNPH1P31943 449 aaKnown RBP12.6□□□□□ -0.39
TROAP-211ENST00000549891 SOX3P41225 446 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 TGM3Q08188 693 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 STX4Q12846 297 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 SLBPQ14493 270 aaKnown RBP eCLIP12.6□□□□□ -0.39
TROAP-211ENST00000549891 XKR6Q5GH73 641 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 B3GNT6Q6ZMB0 384 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 SLCO4C1Q6ZQN7 724 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 RTL4Q6ZR62 310 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 FAM109AQ8N4B1 249 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 GOLM1Q8NBJ4 401 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 OR5L2Q8NGL0 311 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 OR8K3Q8NH51 312 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 SLCO2A1Q92959 643 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 KIAA1191Q96A73 305 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 LRRC39Q96DD0 335 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 CFAP36Q96G28 342 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 SGCZQ96LD1 299 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 RASL10BQ96S79 203 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 SMC6Q96SB8 1091 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 IL1RL2Q9HB29 575 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 PNPLA3Q9NST1 481 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 GPRC5BQ9NZH0 403 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 CTNNAL1Q9UBT7 734 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 IKZF3Q9UKT9 509 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 CLDN16Q9Y5I7 305 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 MTORP42345 2549 aa12.6□□□□□ -0.39
TROAP-211ENST00000549891 FAM47E-STBD1D6RA91 191 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 WWP2O00308 870 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 PRKNO60260 465 aaPredicted RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 SUSD5O60279 629 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 CTNSO60931 367 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 IGHG3P01860 377 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 P04436 131 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ELK3P41970 407 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 HNRNPFP52597 415 aaKnown RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 PLA2G16P53816 162 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 MTTPP55157 894 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 LIM2P55344 173 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ILF2Q12905 390 aaKnown RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 SERTAD2Q14140 314 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 FRG1Q14331 258 aaKnown RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 MORF4L2Q15014 288 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ZNF585AQ6P3V2 769 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 OPN5Q6U736 354 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 C16orf47Q6ZP98 133 aaPredicted RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 FAM47EQ6ZV65 393 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 CLNKQ7Z7G1 428 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 TCAIMQ8N3R3 496 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 TMEM52Q8NDY8 209 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 OR5M9Q8NGP3 310 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 RHBDF1Q96CC6 855 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 QRFPRQ96P65 431 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 OSBPL9Q96SU4 736 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ALOXE3Q9BYJ1 711 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ROGDIQ9GZN7 287 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 EHD1Q9H4M9 534 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 CNOT10Q9H9A5 744 aaKnown RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
TROAP-211ENST00000549891 SACM1LQ9NTJ5 587 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 COPS7AQ9UBW8 275 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 VTI1BQ9UEU0 232 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 CHMP2BQ9UQN3 213 aa12.59□□□□□ -0.39
TROAP-211ENST00000549891 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms