RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 C7orf57Q8NEG2 295 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 OR2L5Q8NG80 312 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 OR52N2Q8NGI0 321 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 OR8K3Q8NH51 312 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 ASB15Q8WXK1 588 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 DAZLQ92904 295 aaKnown RBP11.95□□□□□ -0.5
PTCH1-218ENST00000548945 RHBDF1Q96CC6 855 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 CFAP36Q96G28 342 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 QRFPRQ96P65 431 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 EGFL8Q99944 293 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 POPDC3Q9HBV1 291 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 KCNJ16Q9NPI9 418 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 NPDC1Q9NQX5 325 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-218ENST00000548945 HPF1Q9NWY4 346 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 GPRC5BQ9NZH0 403 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 KCMF1Q9P0J7 381 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 MYOTQ9UBF9 498 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 TNFRSF10DQ9UBN6 386 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 KCNN3Q9UGI6 736 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 CHMP2BQ9UQN3 213 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 ARHGAP21Q5T5U3 1957 aa11.95□□□□□ -0.5
PTCH1-218ENST00000548945 NPEPPSL1A6NEC2 478 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 CYR61O00622 381 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 OR2J2O76002 312 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 WDR47O94967 919 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 HOXD4P09016 255 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SAT1P21673 171 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 HNRNPFP52597 415 aaKnown RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 PPIAP62937 165 aaKnown RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 MGAT5Q09328 741 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SLBPQ14493 270 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 CDKL4Q5MAI5 379 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 NDUFAF5Q5TEU4 345 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 TRIM40Q6P9F5 258 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 HSDL2Q6YN16 418 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 GK5Q6ZS86 529 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SYDE1Q6ZW31 735 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 FRA10AC1Q70Z53 315 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SLC22A16Q86VW1 577 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 TCAIMQ8N3R3 496 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 MORN4Q8NDC4 146 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 TMEM52Q8NDY8 209 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 OR2M7Q8NG81 312 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 OR14A16Q8NHC5 309 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 KIF18AQ8NI77 898 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 KIAA1191Q96A73 305 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 VPS39Q96JC1 886 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SGCZQ96LD1 299 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 RASL10BQ96S79 203 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 REXO4Q9GZR2 422 aaKnown RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
PTCH1-218ENST00000548945 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 NSMCE4AQ9NXX6 385 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 CTNNAL1Q9UBT7 734 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 VTI1BQ9UEU0 232 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 SNX12Q9UMY4 172 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 DAPP1Q9UN19 280 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 PSAT1Q9Y617 370 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 CLCA3PQ9Y6N3 262 aa11.94□□□□□ -0.5
PTCH1-218ENST00000548945 FREM3P0C091 2139 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 FAM95CA0A1B0GW59 222 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 ANKDD1BA6NHY2 528 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 BCKDKO14874 412 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 PRKNO60260 465 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 CTNSO60931 367 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 PDE9AO76083 593 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 GLSO94925 669 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 OR6B1O95007 311 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 TBX6O95947 436 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 IGHG3P01860 377 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 PPP2R1BP30154 601 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 GGT5P36269 586 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 MTTPP55157 894 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 LIM2P55344 173 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 ARL4CP56559 192 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 TAS2R39P59534 338 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 PLGLB1Q02325 96 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 TGM3Q08188 693 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 PMPCAQ10713 525 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 BMPR2Q13873 1038 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 SERTAD2Q14140 314 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 TSNQ15631 228 aaKnown RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 GXYLT1Q4G148 440 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 XKR6Q5GH73 641 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 ABHD17CQ6PCB6 329 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 SYT10Q6XYQ8 523 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 GOLM1Q8NBJ4 401 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 CCT6BQ92526 530 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 FAM173AQ9BQD7 235 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 WDR83Q9BRX9 315 aaKnown RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 TTTY12Q9BZ98 90 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 ROGDIQ9GZN7 287 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 DERL2Q9GZP9 239 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 DEFB127Q9H1M4 99 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms