RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FRG2BQ96QU4 278 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 CSF3RQ99062 836 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 CENPKQ9BS16 269 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 MFRPQ9BY79 579 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 C12orf65Q9H3J6 166 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 LYRM4Q9HD34 91 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 PSD3Q9NYI0 1048 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 LGALS13Q9UHV8 139 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 ZNF225Q9UK10 706 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 PLAAQ9Y263 795 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 MMACHCQ9Y4U1 282 aa17.59■□□□□ 0.41
PRPF40B-206ENST00000547764 PLPP1O14494 284 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 TUBBP07437 444 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 MYL2P10916 166 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 ITGAMP11215 1152 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 CUL3Q13618 768 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 BTBD16Q32M84 506 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 PLAG1Q6DJT9 500 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 PAPD4Q6PIY7 484 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 TRABD2AQ86V40 505 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 SCUBE1Q8IWY4 988 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 MAGEB10Q96LZ2 347 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 LPAR4Q99677 370 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 MAPKAP1Q9BPZ7 522 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 EPN3Q9H201 632 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 PRTFDC1Q9NRG1 225 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 PPT2Q9UMR5 302 aa17.58■□□□□ 0.4
PRPF40B-206ENST00000547764 TCRBV16S1A1N1A0A5B0 115 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 CLDN4O14493 209 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 OR4F21O95013 312 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 TSFMP43897 325 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ARFIP1P53367 373 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 HSD17B7P56937 341 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 AP2B1P63010 937 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 IFT88Q13099 833 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 SLAMF1Q13291 335 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 RCN2Q14257 317 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 SGO1Q5FBB7 561 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 C10orf62Q5T681 223 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 FAM219BQ5XKK7 198 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 JMJD6Q6NYC1 403 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 IGFL2Q6UWQ7 119 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ISLR2Q6UXK2 745 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ZNF595Q8IYB9 648 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ZADH2Q8N4Q0 377 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 SIRT6Q8N6T7 355 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ARMC2Q8NEN0 867 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 TM9SF4Q92544 642 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 CCDC126Q96EE4 140 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 TMEM109Q9BVC6 243 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ZNF717Q9BY31 904 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 ELOVL6Q9H5J4 265 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 PTGFRNQ9P2B2 879 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 TRPS1Q9UHF7 1281 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 MRPS33Q9Y291 106 aaKnown RBP17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 CLDN16Q9Y5I7 305 aa17.57■□□□□ 0.4
PRPF40B-206ENST00000547764 CNTRLQ7Z7A1 2325 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 TGFBR3LH3BV60 316 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 MLYCDO95822 493 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 BSGP35613 385 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 SOX11P35716 441 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 TLE1Q04724 770 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 SLC13A2Q13183 592 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 EXT1Q16394 746 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 CRB2Q5IJ48 1285 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 SLC6A19Q695T7 634 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 LINC00696Q6ZRV3 163 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 GPRIN3Q6ZVF9 776 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 SRRM1Q8IYB3 904 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 ZCCHC7Q8N3Z6 543 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 CCNYL1Q8N7R7 359 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 BANPQ8N9N5 519 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 CCDC63Q8NA47 563 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 MYRIPQ8NFW9 859 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 RDH11Q8TC12 318 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 M1APQ8TC57 530 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 LMF1Q96S06 567 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 ZNF382Q96SR6 550 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 SERPINI1Q99574 410 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 GSTO2Q9H4Y5 243 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 FARSBQ9NSD9 589 aaKnown RBP17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 MKS1Q9NXB0 559 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 FBXW2Q9UKT8 454 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 SNX6Q9UNH7 406 aa17.56■□□□□ 0.4
PRPF40B-206ENST00000547764 A8MUA0 341 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 EEDO75530 441 aaKnown RBP17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 PDYNP01213 254 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 CPA3P15088 417 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 SLC26A5P58743 744 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 LCP2Q13094 533 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 MFAP5Q13361 173 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 B3GNTL1Q67FW5 361 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 CLNKQ7Z7G1 428 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 CDYL2Q8N8U2 506 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 SELENOMQ8WWX9 145 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 PNPLA2Q96AD5 504 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 APOPT1Q96IL0 206 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 TRIM4Q9C037 500 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 EPS8L2Q9H6S3 715 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 DDX31Q9H8H2 851 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms