RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	NEIL2	Q969S2	332 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	C16orf45	Q96MC5	204 aa	Predicted RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	AGAP4	Q96P64	663 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	WDR77	Q9BQA1	342 aa	Predicted RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC29A3	Q9BZD2	475 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	LHPP	Q9H008	270 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	ILKAP	Q9H0C8	392 aa	Predicted RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	PELI2	Q9HAT8	420 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	ANKH	Q9HCJ1	492 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	RIC8B	Q9NVN3	520 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	CTNNAL1	Q9UBT7	734 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	MRPS2	Q9Y399	296 aa	Known RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	KCNE2	Q9Y6J6	123 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	SETX	Q7Z333	2677 aa	Known RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	GTF3C1	Q12789	2109 aa		7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	PRRC2C	Q9Y520	2896 aa	Known RBP	7.25	□□□□□ -1.25
SNHG1-223	ENST00000545440	EXPH5	Q8NEV8	1989 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	SCO2	A0A1W2PP80	73 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CXorf49	A8MYA2	514 aa	Predicted RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR1F1	O43749	312 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	LCMT2	O60294	686 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	VPS4B	O75351	444 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	PIAS1	O75925	651 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	KLHL18	O94889	574 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	BMP10	O95393	424 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	STATH	P02808	62 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	HEXB	P07686	556 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	C8orf89	P0DMQ9	161 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	STMN1	P16949	149 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	IL10	P22301	178 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	GSTM2	P28161	218 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	XCR1	P46094	333 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC6A12	P48065	614 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	GPX6	P59796	221 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ATP6V0D1	P61421	351 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	MAT1A	Q00266	395 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	GUCY1A3	Q02108	690 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	EEF1A2	Q05639	463 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	RGS1	Q08116	209 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440		Q0VFX4	171 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	MFAP5	Q13361	173 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CSHL1	Q14406	222 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	USP10	Q14694	798 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	TGFBI	Q15582	683 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	INPP5J	Q15735	1006 aa	Predicted RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	SYT16	Q17RD7	645 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	WHAMMP3	Q1A5X7	153 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CRB2	Q5IJ48	1285 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CDKL4	Q5MAI5	379 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CATSPERE	Q5SY80	951 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	B3GNTL1	Q67FW5	361 aa	Predicted RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	TMEM205	Q6UW68	189 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZDHHC24	Q6UX98	284 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ISLR2	Q6UXK2	745 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	C3orf62	Q6ZUJ4	267 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ABHD13	Q7L211	337 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	PRSS41	Q7RTY9	318 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	THOC6	Q86W42	341 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	PDSS2	Q86YH6	399 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	KBTBD2	Q8IY47	623 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	AFAP1L2	Q8N4X5	818 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZNF740	Q8NDX6	193 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR51Q1	Q8NH59	317 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZCCHC10	Q8TBK6	192 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	NT5C	Q8TCD5	201 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ANKRD49	Q8WVL7	239 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	C8orf44	Q96CB5	159 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	RHBDF1	Q96CC6	855 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	THOC3	Q96J01	351 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	MAP6	Q96JE9	813 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	TSNARE1	Q96NA8	513 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR1F2P	Q96R84	312 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	EGFL8	Q99944	293 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	AIF1L	Q9BQI0	150 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	MESP1	Q9BRJ9	268 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	VN1R1	Q9GZP7	353 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZNF700	Q9H0M5	742 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	EPS8L2	Q9H6S3	715 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CNOT10	Q9H9A5	744 aa	Known RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZNF160	Q9HCG1	818 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	LUZP4	Q9P127	313 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	C19orf25	Q9UFG5	118 aa	Predicted RBP	7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZFP69B	Q9UJL9	534 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	VPS4A	Q9UN37	437 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC22A14	Q9Y267	594 aa		7.24	□□□□□ -1.25
SNHG1-223	ENST00000545440	CROCC	Q5TZA2	2017 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	HECTD1	Q9ULT8	2610 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	BLACE	A4D250	179 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	URAD	A6NGE7	173 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	SGK494	L7N484	410 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	PHGDH	O43175	533 aa	Known RBP	7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	GALR3	O60755	368 aa	Predicted RBP	7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	RDH16	O75452	317 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	WDR47	O94967	919 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	SERPINA7	P05543	415 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	PRR35	P0CG20	571 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	CCDC166	P0CW27	439 aa		7.23	□□□□□ -1.25
SNHG1-223	ENST00000545440	ICAM2	P13598	275 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms