RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 L2HGDHQ9H9P8 463 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 HCN3Q9P1Z3 774 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 COPG2Q9UBF2 871 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 TMCO1Q9UM00 188 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 TNPO3Q9Y5L0 923 aaKnown RBP6.96□□□□□ -1.3
CPSF7-224ENST00000544990 DOCK10Q96BY6 2186 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 ATMQ13315 3056 aa6.96□□□□□ -1.3
CPSF7-224ENST00000544990 LOC102723996A0A087X1L8 192 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 IQANK1A0A1B0GTG1 560 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TRIM49D1C9J1S8 452 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PSMD12O00232 456 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 RIPK2O43353 540 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 CHST10O43529 356 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 RDH16O75452 317 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 CLEC3AO75596 197 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 UQCRHP07919 91 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF888P0CJ79 500 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 C8orf89P0DMQ9 161 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 MTHFD2P13995 350 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 JAK1P23458 1154 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 HNF4AP41235 474 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 CASP2P42575 452 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 MAGEA12P43365 314 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PIK3CGP48736 1102 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 AGTR2P50052 363 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 ALDH18A1P54886 795 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 RAB8AP61006 207 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TLE1Q04724 770 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TGM3Q08188 693 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 RAPSNQ13702 412 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 DOC2AQ14183 400 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 SLC29A2Q14542 456 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TBCCQ15814 346 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PFKFB4Q16877 469 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TOR1AIP1Q5JTV8 583 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TEX35Q5T0J7 233 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 UBAP2Q5T6F2 1119 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 AGAP7PQ5VUJ5 663 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 FAAH2Q6GMR7 532 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 METTL2BQ6P1Q9 378 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TRIM40Q6P9F5 258 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TMEM205Q6UW68 189 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 Q6ZS46 218 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 CPEB2Q7Z5Q1 589 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PDSS2Q86YH6 399 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 KBTBD2Q8IY47 623 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 ZADH2Q8N4Q0 377 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PLPP5Q8NEB5 264 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 SRFBP1Q8NEF9 429 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 UTP15Q8TED0 518 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 CREB3L4Q8TEY5 395 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 UBTD2Q8WUN7 234 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 DCAKDQ8WVC6 231 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 C8orf44Q96CB5 159 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 MTBPQ96DY7 904 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 WDR34Q96EX3 536 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PEX11GQ96HA9 241 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 FAM46AQ96IP4 442 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 THOC3Q96J01 351 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 SCYL1Q96KG9 808 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 AGAP4Q96P64 663 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 TUBB6Q9BUF5 446 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 VN1R1Q9GZP7 353 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF552Q9H707 407 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF160Q9HCG1 818 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 RIC8BQ9NVN3 520 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 CPSF2Q9P2I0 782 aaKnown RBP6.95□□□□□ -1.3
CPSF7-224ENST00000544990 ADGRE2Q9UHX3 823 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 PCSK5Q92824 1860 aa6.95□□□□□ -1.3
CPSF7-224ENST00000544990 IGHV1-45A0A0A0MS14 117 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 A0A1W2PQ72 361 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 LRIT2A6NDA9 550 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF860A6NHJ4 632 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 MASP2O00187 686 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 RGS13O14921 159 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ERI3O43414 337 aaKnown RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 KLK8O60259 260 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 SMIM24O75264 130 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 JRKO75564 520 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 SERPINA7P05543 415 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 FHP07954 510 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 FAM153BP0C7A2 387 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 SMIM10L1P0DMW3 83 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 COX6A1P12074 109 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 RNH1P13489 461 aaKnown RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 SERPINB1P30740 379 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 BTN3A2P78410 334 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 PHEXP78562 749 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 EEF1A2Q05639 463 aaKnown RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ACTN3Q08043 901 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 GTF2H2Q13888 395 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 E2F2Q14209 437 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 RCN2Q14257 317 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 PCBP2Q15366 365 aaKnown RBP eCLIP6.94□□□□□ -1.33e-31■■■■□ 20.5
CPSF7-224ENST00000544990 NSDHLQ15738 373 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 FAM153CQ494X1 144 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 TECRLQ5HYJ1 363 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 LIPJQ5W064 366 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms