RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RNF112Q9ULX5 631 aa15.15■□□□□ 0.02
DDX55-212ENST00000544738 MRPS33Q9Y291 106 aaKnown RBP15.15■□□□□ 0.02
DDX55-212ENST00000544738 TMEM200CA6NKL6 621 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 C4orf51C9J302 202 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 B3GALT2O43825 422 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 C1QAP02745 245 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 HNRNPH1P31943 449 aaKnown RBP15.14■□□□□ 0.01
DDX55-212ENST00000544738 MAGEA4P43358 317 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 HSPA7P48741 367 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 HSD17B7P56937 341 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 TGM3Q08188 693 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 NAB1Q13506 487 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 RCN2Q14257 317 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 TERF2Q15554 542 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 OR4D1Q15615 310 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 ADPRMQ3LIE5 342 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 KRTCAP3Q53RY4 240 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 XKR6Q5GH73 641 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 PAGE2BQ5JRK9 111 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 SYT10Q6XYQ8 523 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 C3P1Q6ZMU1 363 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 PPM1NQ8N819 430 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 SNX31Q8N9S9 440 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 ACBD4Q8NC06 268 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 OR2L5Q8NG80 312 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 SDCCAG3Q96C92 435 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 SCMH1Q96GD3 660 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 DEFB126Q9BYW3 111 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 REXO4Q9GZR2 422 aaKnown RBP15.14■□□□□ 0.01
DDX55-212ENST00000544738 AICDAQ9GZX7 198 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 TSPAN10Q9H1Z9 355 aaPredicted RBP15.14■□□□□ 0.01
DDX55-212ENST00000544738 NMRAL1Q9HBL8 299 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 NECTIN3Q9NQS3 549 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 ANKRD10Q9NXR5 420 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 LRFN1Q9P244 771 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 ZNF835Q9Y2P0 537 aa15.14■□□□□ 0.01
DDX55-212ENST00000544738 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
DDX55-212ENST00000544738 JMJD1CQ15652 2540 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 FCHO1O14526 889 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 ZNHIT1O43257 154 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 MAN1A2O60476 641 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 CCNT2O60583 730 aaKnown RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 SP1P08047 785 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 CRABP2P29373 138 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 CYB561P49447 251 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 RAB38P57729 211 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 RUNX2Q13950 521 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 DOC2AQ14183 400 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 TBCCQ15814 346 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 SPINK14Q6IE38 97 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 SLC25A25Q6KCM7 469 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 RAPH1Q70E73 1250 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 LRRC70Q7Z2Q7 622 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 ZNF572Q7Z3I7 529 aaPredicted RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 SCUBE1Q8IWY4 988 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 SRFBP1Q8NEF9 429 aaKnown RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 NFAM1Q8NET5 270 aaPredicted RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 B3GNT7Q8NFL0 401 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 SERINC2Q96SA4 455 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 CD244Q9BZW8 370 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 ROGDIQ9GZN7 287 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 COPS7BQ9H9Q2 264 aaPredicted RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 KLHL1Q9NR64 748 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 TNFRSF10DQ9UBN6 386 aa15.13■□□□□ 0.01
DDX55-212ENST00000544738 ZNF490Q9ULM2 529 aaPredicted RBP15.13■□□□□ 0.01
DDX55-212ENST00000544738 ASPDHA6ND91 283 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 NPIPA5E9PKD4 350 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 NEURL1O76050 574 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 TFEBP19484 476 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 TPP2P29144 1249 aaPredicted RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 CASP2P42575 452 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 CLCN2P51788 898 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 PLA2G16P53816 162 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 MTTPP55157 894 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 MLF1P58340 268 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 ALDH6A1Q02252 535 aaKnown RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 IRF8Q02556 426 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 SLMAPQ14BN4 828 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 FBXO48Q5FWF7 155 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 Q6ZPB1 254 aaPredicted RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 CCDC91Q7Z6B0 441 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 ZNF595Q8IYB9 648 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 ARMC10Q8N2F6 343 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 KIF2BQ8N4N8 673 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 FBF1Q8TES7 1133 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 AGAP11Q8TF27 550 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 THAP3Q8WTV1 239 aaPredicted RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 UBE2E3Q969T4 207 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 ESAMQ96AP7 390 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 TMEM125Q96AQ2 219 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 GPR137Q96N19 417 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 QRFPRQ96P65 431 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 TREX2Q9BQ50 279 aaPredicted RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 ZNF559Q9BR84 538 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 TRIM45Q9H8W5 580 aaPredicted RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 PRTFDC1Q9NRG1 225 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 CCM2LQ9NUG4 571 aaPredicted RBP15.12■□□□□ 0.01
DDX55-212ENST00000544738 NUDT4Q9NZJ9 180 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 NPIPA1Q9UND3 350 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms