RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 GTF2H2Q13888 395 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 NAA30Q147X3 362 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SETDB1Q15047 1291 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PCOLCEQ15113 449 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RASA2Q15283 850 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 OR4D1Q15615 310 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ADPRMQ3LIE5 342 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CCDC153Q494R4 210 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PLEKHN1Q494U1 663 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 NADK2Q4G0N4 442 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 KRTCAP3Q53RY4 240 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CFAP157Q5JU67 520 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ACER2Q5QJU3 275 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM69BQ5VUD6 431 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 GTF2H2CQ6P1K8 395 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PAOXQ6QHF9 649 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ADGRD1Q6QNK2 874 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 TIFABQ6ZNK6 161 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 MILR1Q7Z6M3 343 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CMC1Q7Z7K0 106 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CROCCP2Q86T23 111 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 LAPTM4BQ86VI4 370 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RPS19BP1Q86WX3 136 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 LAS2Q8IYD9 372 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 DND1Q8IYX4 353 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SPATA6LQ8N4H0 392 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ARHGEF39Q8N4T4 335 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 TMEM156Q8N614 296 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SIRT6Q8N6T7 355 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RBMXL3Q8N7X1 1067 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 POGLUT1Q8NBL1 392 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ST6GALNAC3Q8NDV1 305 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 MYRIPQ8NFW9 859 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 BRIX1Q8TDN6 353 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CREB3L4Q8TEY5 395 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 KCTD4Q8WVF5 259 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 UBLCP1Q8WVY7 318 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ISL2Q96A47 359 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 C8orf44Q96CB5 159 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 MS4A6EQ96DS6 147 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PHF21BQ96EK2 531 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 VMP1Q96GC9 406 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ATOH8Q96SQ7 321 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 RHOXF2Q9BQY4 288 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 FAIM2Q9BWQ8 316 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SHCBP1LQ9BZQ2 653 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ADAP2Q9NPF8 381 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PFDN4Q9NQP4 134 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PRTFDC1Q9NRG1 225 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 CPSF2Q9P2I0 782 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 SUCOQ9UBS9 1254 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 DMGDHQ9UI17 866 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PPT2Q9UMR5 302 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PCDHGA10Q9Y5H3 936 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 PRRC2CQ9Y520 2896 aaKnown RBP5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 HIVEP3Q5T1R4 2406 aa5.27□□□□□ -1.57
CLSTN3-215ENST00000544584 ESPL1Q14674 2120 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TCRBV16S1A1N1A0A5B0 115 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF860A6NHJ4 632 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GOLGA6L10A6NI86 522 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 FANCGO15287 622 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 RIPK2O43353 540 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 KLK8O60259 260 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 OR10H2O60403 315 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 NRP2O60462 931 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 CDH16O75309 829 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ULK1O75385 1050 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 CRCPO75575 148 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 PIAS1O75925 651 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM155BO75949 473 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ZFAND5O76080 213 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SEC24DO94855 1032 aaPredicted RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SEMA3DO95025 777 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 CHEK2O96017 543 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ALDOAP04075 364 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SMIM10L1P0DMW3 83 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 HSD3B1P14060 373 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 KRT15P19012 456 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 NR1D1P20393 614 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 HIST1H1TP22492 207 aaPredicted RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ATP5F1P24539 256 aaPredicted RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ATP5A1P25705 553 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 HSD3B2P26439 372 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 DEKP35659 375 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SOX11P35716 441 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GSTM5P46439 218 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TMED10P49755 219 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TNFSF10P50591 281 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SSR4P51571 173 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC26A5P58743 744 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 YBX1P67809 324 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 PSPHP78330 225 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 RPP38P78345 283 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 RHAGQ02094 409 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 DDX39BQ13838 428 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ELAVL1Q15717 326 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 IGFBP7Q16270 282 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms