RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ST3GAL4Q11206 333 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 NFE2L1Q14494 772 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 EXOC3L2Q2M3D2 409 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 HNRNPA1L2Q32P51 320 aaKnown RBP11.97□□□□□ -0.49
RNF4-222ENST00000541204 ARMCX4Q5H9R4 360 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 TUBA3EQ6PEY2 450 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ZNF605Q86T29 641 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ETFBKMTQ8IXQ9 262 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 C11orf65Q8NCR3 313 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 OR9Q2Q8NGE9 314 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ZNF480Q8WV37 535 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 OR8D1Q8WZ84 308 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 HERVK_113Q902F9 699 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 COQ10AQ96MF6 247 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ACAT2Q9BWD1 397 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 SIAEQ9HAT2 523 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 GPATCH2Q9NW75 528 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 FKBP14Q9NWM8 211 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 UGT2A1Q9Y4X1 527 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 SPTBN5Q9NRC6 3674 aaKnown RBP11.97□□□□□ -0.49
RNF4-222ENST00000541204 GNG14A0A1W2PPG7 69 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 J3KTA2 159 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 NPC1O15118 1278 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 ADAMDEC1O15204 470 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 EPHX1P07099 455 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 PCGF2P35227 344 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 RCVRNP35243 200 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 PCYT1AP49585 367 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 TBPL1P62380 186 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 IER5LQ5T953 404 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 MLIPQ5VWP3 458 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 DESI1Q6ICB0 168 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 PNCKQ6P2M8 343 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 LGI4Q8N135 537 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 PLA2G15Q8NCC3 412 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 VPS37AQ8NEZ2 397 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 OR4K1Q8NGD4 311 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 HUS1BQ8NHY5 278 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 TXNDC15Q96J42 360 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 LRIG1Q96JA1 1093 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 IL17FQ96PD4 163 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 VPS35Q96QK1 796 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 DYRK4Q9NR20 520 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 BTNL2Q9UIR0 455 aa11.97□□□□□ -0.49
RNF4-222ENST00000541204 MGAT4DA6NG13 374 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 PRAMEF25A6NGN4 478 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 HOXC11O43248 304 aaPredicted RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 C1orf105O95561 183 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 ZNF8P17098 575 aaPredicted RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 IDSP22304 550 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 RGS6P49758 472 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 RPS13P62277 151 aaKnown RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 CCDC92Q53HC0 331 aaPredicted RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 ZNF547Q8IVP9 402 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 METTL4Q8N3J2 472 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 OR7G3Q8NG95 312 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 ATL1Q8WXF7 558 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 FAM129BQ96TA1 746 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 SPATA9Q9BWV2 254 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 ROGDIQ9GZN7 287 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 NXF2Q9GZY0 626 aaKnown RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 MS4A12Q9NXJ0 267 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 ZNF232Q9UNY5 417 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 QSOX1O00391 747 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 UGDHO60701 494 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 POP7O75817 140 aaKnown RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 C21orf58P58505 322 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 ZNF45Q02386 682 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 UBE3AQ05086 875 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 TP53BP2Q13625 1128 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 TEAD4Q15561 434 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 MICAQ29983 383 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 GAB4Q2WGN9 574 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 ZNF385BQ569K4 471 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 KBTBD8Q8NFY9 601 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 OR4C15Q8NGM1 316 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 EFHD2Q96C19 240 aaPredicted RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 MAGEB10Q96LZ2 347 aaPredicted RBP11.96□□□□□ -0.49
RNF4-222ENST00000541204 ASB16Q96NS5 453 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 COL21A1Q96P44 957 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 CORO2BQ9UQ03 480 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 IFT52Q9Y366 437 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 PCDHGA3Q9Y5H0 932 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 KCNE2Q9Y6J6 123 aa11.96□□□□□ -0.49
RNF4-222ENST00000541204 PRR23AA6NEV1 266 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 NFATC1O95644 943 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 TGFB1P01137 390 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 GABRB1P18505 474 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 ITGB7P26010 798 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 IL12RB1P42701 662 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 PXNP49023 591 aaPredicted RBP11.96□□□□□ -0.5
RNF4-222ENST00000541204 MVDP53602 400 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 HBA1P69905 142 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 PRKCDQ05655 676 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 ELAVL3Q14576 367 aaKnown RBP11.96□□□□□ -0.5
RNF4-222ENST00000541204 SF3B4Q15427 424 aaKnown RBP eCLIP11.96□□□□□ -0.53e-8■■■□□ 15.6
RNF4-222ENST00000541204 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.5
RNF4-222ENST00000541204 C10orf62Q5T681 223 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms