RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TIMM22Q9Y584 194 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 USP24Q9UPU5 2620 aa17.7■□□□□ 0.42
VPS33A-205ENST00000541169 NUP210LQ5VU65 1888 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 PTPRQQ9UMZ3 2332 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 LOC102723996A0A087X1L8 192 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 A0A0A6YYD5 115 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 WDR91A4D1P6 747 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 SAP18O00422 153 aaKnown RBP17.69■□□□□ 0.42
VPS33A-205ENST00000541169 KLF11O14901 512 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 RGS14O43566 566 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 ALOX12BO75342 701 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 RSL1D1O76021 490 aaKnown RBP17.69■□□□□ 0.42
VPS33A-205ENST00000541169 SFTPCP11686 197 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 ICAM2P13598 275 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 PRPH2P23942 346 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 WDR4P57081 412 aaKnown RBP17.69■□□□□ 0.42
VPS33A-205ENST00000541169 SNRPNP63162 240 aaKnown RBP17.69■□□□□ 0.42
VPS33A-205ENST00000541169 ACSM2AQ08AH3 577 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 ACSM2BQ68CK6 577 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 TMEM205Q6UW68 189 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 ZCCHC23Q6ZST2 131 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 PPP1R32Q7Z5V6 425 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 LAPTM4BQ86VI4 370 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 CLEC1AQ8NC01 280 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 TANKQ92844 425 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 ACPTQ9BZG2 426 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 LANCL2Q9NS86 450 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 P4HTMQ9NXG6 502 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 G3BP2Q9UN86 482 aaKnown RBP17.69■□□□□ 0.42
VPS33A-205ENST00000541169 WBP11Q9Y2W2 641 aaKnown RBP17.69■□□□□ 0.42
VPS33A-205ENST00000541169 RAP2CQ9Y3L5 183 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 HS3ST3B1Q9Y662 390 aa17.69■□□□□ 0.42
VPS33A-205ENST00000541169 A0A0G2JN53 185 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 ERVH48-1M5A8F1 160 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 CYR61O00622 381 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 SASH3O75995 380 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 ETHE1O95571 254 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 FAM58BPP0C7Q3 252 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 CPN2P22792 545 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 SLC1A6P48664 564 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 PPP2R2AP63151 447 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 OLR1P78380 273 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 RHAGQ02094 409 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 NSDHLQ15738 373 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 SH2D4BQ5SQS7 431 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 CCNYL2Q5T2Q4 361 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 MRM1Q6IN84 353 aaKnown RBP17.68■□□□□ 0.42
VPS33A-205ENST00000541169 GALNT18Q6P9A2 607 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 C19orf48Q6RUI8 117 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 ZNF793Q6ZN11 406 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 COMMD6Q7Z4G1 85 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 CHTF18Q8WVB6 975 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 ZNF717Q9BY31 904 aaPredicted RBP17.68■□□□□ 0.42
VPS33A-205ENST00000541169 MRPL1Q9BYD6 325 aaKnown RBP17.68■□□□□ 0.42
VPS33A-205ENST00000541169 SHCBP1LQ9BZQ2 653 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 ADNPQ9H2P0 1102 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 RIC8BQ9NVN3 520 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 THAP1Q9NVV9 213 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 MCM8Q9UJA3 840 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 HAO1Q9UJM8 370 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 TUBD1Q9UJT1 453 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 DNAJC15Q9Y5T4 150 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 KCNMB2Q9Y691 235 aa17.68■□□□□ 0.42
VPS33A-205ENST00000541169 CCDC88CQ9P219 2028 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 CTNSO60931 367 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 SH3BGRLO75368 114 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 MYO1DO94832 1006 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 B3GALT4O96024 378 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 HPP00738 406 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 CHRNGP07510 517 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 MAPK12P53778 367 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 FOXA1P55317 472 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 TBL3Q12788 808 aaKnown RBP17.67■□□□□ 0.42
VPS33A-205ENST00000541169 AIMP2Q13155 320 aaKnown RBP17.67■□□□□ 0.42
VPS33A-205ENST00000541169 SERTAD2Q14140 314 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 DEFB109BQ30KR1 87 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 KIRREL2Q6UWL6 708 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 SHISA6Q6ZSJ9 500 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 NDUFAF7Q7L592 441 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 PRSS58Q8IYP2 241 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 RNF175Q8N4F7 328 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 LSM14AQ8ND56 463 aaKnown RBP17.67■□□□□ 0.42
VPS33A-205ENST00000541169 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 PTCHD1Q96NR3 888 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 KCNA7Q96RP8 456 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 TUBB6Q9BUF5 446 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 MANSC1Q9H8J5 431 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 ATP13A2Q9NQ11 1180 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 ZNF446Q9NWS9 450 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 TMED5Q9Y3A6 229 aa17.67■□□□□ 0.42
VPS33A-205ENST00000541169 PKD1L2Q7Z442 2459 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 SLCO1B7G3V0H7 640 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 RTCAO00442 366 aaKnown RBP17.66■□□□□ 0.42
VPS33A-205ENST00000541169 SOCS6O14544 535 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 PROM1O43490 865 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 B4GALT2O60909 372 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 KLK1P06870 262 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms