RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PRAMEF13Q5VWM6 474 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 PAOXQ6QHF9 649 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 CRTC3Q6UUV7 619 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 NXPE4Q6UWF7 544 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ZNF517Q6ZMY9 492 aaPredicted RBP7.98□□□□□ -1.13
CHD4-208ENST00000540960 GK5Q6ZS86 529 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 RPS27LQ71UM5 84 aaKnown RBP7.98□□□□□ -1.13
CHD4-208ENST00000540960 PAGE2Q7Z2X7 111 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ZNF438Q7Z4V0 828 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ABI3BPQ7Z7G0 1075 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 DHFR2Q86XF0 187 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 HID1Q8IV36 788 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 VRK3Q8IV63 474 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ZNF547Q8IVP9 402 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 SLITRK4Q8IW52 837 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 AQP12AQ8IXF9 295 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 LAS2Q8IYD9 372 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 SFRP1Q8N474 314 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 OR8J3Q8NGG0 315 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 SLC26A7Q8TE54 656 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ZNF480Q8WV37 535 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ESAMQ96AP7 390 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 LRRC58Q96CX6 371 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 MTERF3Q96E29 417 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 RSRC1Q96IZ7 334 aaKnown RBP7.98□□□□□ -1.13
CHD4-208ENST00000540960 CDK15Q96Q40 435 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 OR2M4Q96R27 311 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 B3GNT4Q9C0J1 378 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 S100A14Q9HCY8 104 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 GPR27Q9NS67 375 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ASF1BQ9NVP2 202 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 TRNAU1APQ9NX07 287 aaKnown RBP7.98□□□□□ -1.13
CHD4-208ENST00000540960 TMEM181Q9P2C4 612 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 ZNF225Q9UK10 706 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 CCL27Q9Y4X3 112 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 AP1M2Q9Y6Q5 423 aa7.98□□□□□ -1.13
CHD4-208ENST00000540960 TRPM6Q9BX84 2022 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 SPTY2D1-AS1A0A0U1RR47 76 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 E7ENX8 843 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 FFAR3O14843 346 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 YY2O15391 372 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 GPR42O15529 346 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 PEX1O43933 1283 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 GUCY1B2O75343 617 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 PDYNP01213 254 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 GPIP06744 558 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 ERGP11308 486 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 G6PDP11413 515 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 IL10P22301 178 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 F8A1P23610 371 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 ITGA3P26006 1051 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 SHMT2P34897 504 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 HSPA13P48723 471 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 RAB28P51157 221 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 DIO3P55073 304 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 TAP2Q03519 686 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 TGM3Q08188 693 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 DOC2AQ14183 400 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 TCEA2Q15560 299 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 MUM1Q2TAK8 710 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 VPS26BQ4G0F5 336 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 C14orf28Q4W4Y0 310 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 TMEM35AQ53FP2 167 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 SGO1Q5FBB7 561 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 ZNF648Q5T619 568 aaPredicted RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 JMJD6Q6NYC1 403 aaPredicted RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 DOK6Q6PKX4 331 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 SLCO4C1Q6ZQN7 724 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 IKBIPQ70UQ0 350 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 C11orf96Q7Z7L8 435 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 FUNDC1Q8IVP5 155 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 RBM12BQ8IXT5 1001 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 TMEM132CQ8N3T6 1108 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 RCBTB1Q8NDN9 531 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 SRFBP1Q8NEF9 429 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 SLC13A3Q8WWT9 602 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 SNRNP40Q96DI7 357 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 DUS3LQ96G46 650 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 MARK4Q96L34 752 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 FCRL1Q96LA6 429 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 NPAS2Q99743 824 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 GPATCH1Q9BRR8 931 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 SPATA9Q9BWV2 254 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 ATG10Q9H0Y0 220 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 Q9H521 79 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 FAM120CQ9NX05 1096 aaKnown RBP7.97□□□□□ -1.13
CHD4-208ENST00000540960 ABCD2Q9UBJ2 740 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 FAM8A1Q9UBU6 413 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 MAGEL2Q9UJ55 1249 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 PILRAQ9UKJ1 303 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 TMEM98Q9Y2Y6 226 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 MYO7BQ6PIF6 2116 aa7.97□□□□□ -1.13
CHD4-208ENST00000540960 ZGRF1Q86YA3 2104 aa7.96□□□□□ -1.13
CHD4-208ENST00000540960 TMEM202A6NGA9 273 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ANKDD1BA6NHY2 528 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 EVPLLA8MZ36 301 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 FBP2O00757 339 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms