RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PLGLB1Q02325 96 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 MGAT5Q09328 741 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 EFTUD2Q15029 972 aaKnown RBP eCLIP11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 TSNQ15631 228 aaKnown RBP11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 GXYLT1Q4G148 440 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 HSDL2Q6YN16 418 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 GK5Q6ZS86 529 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 SYDE1Q6ZW31 735 aaPredicted RBP11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 FRA10AC1Q70Z53 315 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 SLC22A16Q86VW1 577 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 TCAIMQ8N3R3 496 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 FAM47BQ8NA70 645 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 GOLM1Q8NBJ4 401 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 MORN4Q8NDC4 146 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 TMEM52Q8NDY8 209 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 C7orf57Q8NEG2 295 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 OR2M7Q8NG81 312 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 OR8K3Q8NH51 312 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 OR14A16Q8NHC5 309 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 CCT6BQ92526 530 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 VPS39Q96JC1 886 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 RASL10BQ96S79 203 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 SERINC2Q96SA4 455 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 WDR83Q9BRX9 315 aaKnown RBP11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 REXO4Q9GZR2 422 aaKnown RBP11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 DEFB127Q9H1M4 99 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 NSMCE4AQ9NXX6 385 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 CTNNAL1Q9UBT7 734 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 VTI1BQ9UEU0 232 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 SNX12Q9UMY4 172 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 DAPP1Q9UN19 280 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 CLCA3PQ9Y6N3 262 aa11.15□□□□□ -0.62
CBX3P4-202ENST00000540428 CELSR1Q9NYQ6 3014 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 A0A0G2JN53 185 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 A0A1B0GVC2 190 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 PINLYPA6NC86 204 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 NKX2-6A6NCS4 301 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 FIGNL2A6NMB9 653 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 NPIPA2E9PIF3 369 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 NPIPA3F8WFD2 350 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 PDE9AO76083 593 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 GLSO94925 669 aaPredicted RBP11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 OR6B1O95007 311 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 TBX6O95947 436 aaPredicted RBP11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 CNR1P21554 472 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 GGT5P36269 586 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 GDF5P43026 501 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 PLA2G16P53816 162 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 LIM2P55344 173 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 ARL4CP56559 192 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 NUP107P57740 925 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 TAS2R39P59534 338 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 TGM3Q08188 693 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 PMPCAQ10713 525 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 BMPR2Q13873 1038 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 SERTAD2Q14140 314 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 TGFBIQ15582 683 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 HYAL4Q2M3T9 481 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 KRTAP21-3Q3LHN1 58 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 XKR6Q5GH73 641 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 CDKL4Q5MAI5 379 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 ABHD17CQ6PCB6 329 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 IL20RBQ6UXL0 311 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 RTL4Q6ZR62 310 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 CLYBLQ8N0X4 340 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC35F6Q8N357 371 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM109AQ8N4B1 249 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 RPRMLQ8N4K4 120 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 OR5L2Q8NGL0 311 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 OR5M3Q8NGP4 307 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 ANKRD49Q8WVL7 239 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 KIAA1191Q96A73 305 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 SGCZQ96LD1 299 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 RUNDC3BQ96NL0 473 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM173AQ9BQD7 235 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF559Q9BR84 538 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 TTTY12Q9BZ98 90 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 ROGDIQ9GZN7 287 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 DERL2Q9GZP9 239 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 COPS7BQ9H9Q2 264 aaPredicted RBP11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 RYDENQ9NUL5 291 aaKnown RBP11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 MOCS1Q9NZB8 636 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 PSAT1Q9Y617 370 aa11.14□□□□□ -0.63
CBX3P4-202ENST00000540428 TACC2O95359 2948 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM166BA8MTA8 275 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 WWP2O00308 870 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 CLGNO14967 610 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 KLK8O60259 260 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 IFNA16P05015 189 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 ACVR2AP27037 513 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 CERS1P27544 350 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 SOX3P41225 446 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 HK2P52789 917 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 STX4Q12846 297 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF460Q14592 562 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 OPN5Q6U736 354 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms