RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 VWA5B1Q5TIE3 1220 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 EPGNQ6UW88 154 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 NLGN4XQ8N0W4 816 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 DTWD1Q8N5C7 304 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 ESX1Q8N693 406 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 FNDC5Q8NAU1 212 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 NLGN4YQ8NFZ3 816 aaPredicted RBP14.6□□□□□ -0.07
DDB1-216ENST00000539739 YIPF2Q9BWQ6 316 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 ZNF717Q9BY31 904 aaPredicted RBP14.6□□□□□ -0.07
DDB1-216ENST00000539739 TRIM4Q9C037 500 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 IFT80Q9P2H3 777 aaPredicted RBP14.6□□□□□ -0.07
DDB1-216ENST00000539739 ACSL6Q9UKU0 697 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 MAP4K5Q9Y4K4 846 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 SPACA6W5XKT8 324 aa14.6□□□□□ -0.07
DDB1-216ENST00000539739 GOLGA8QA0A0J9YX86 632 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 GNG14A0A1W2PPG7 69 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 GOLGA8OA6NCC3 632 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ENO4A6NNW6 628 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 C9J4A7 227 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 GOLGA8NF8WBI6 632 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 PCDH7O60245 1069 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 GUCY1B2O75343 617 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 EEDO75530 441 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 LBPP18428 481 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 EPHA3P29320 983 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 TIA1P31483 386 aaKnown RBP eCLIP14.59□□□□□ -0.07
DDB1-216ENST00000539739 SEC24CP53992 1094 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 SLC9B1Q4ZJI4 515 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 RFTN2Q52LD8 501 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 C6orf136Q5SQH8 315 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ZNF385CQ66K41 422 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 NXNQ6DKJ4 435 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 GALNT18Q6P9A2 607 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 C6orf89Q6UWU4 347 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 CCDC121Q6ZUS5 278 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 CCDC80Q76M96 950 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 MAVSQ7Z434 540 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 CPLX4Q7Z7G2 160 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 CEP70Q8NHQ1 597 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ACTRT2Q8TDY3 377 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 MAELQ96JY0 434 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 EPN3Q9H201 632 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 WDR55Q9H6Y2 383 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 LYRM4Q9HD34 91 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 LYARQ9NX58 379 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 GPN3Q9UHW5 284 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 DCTN4Q9UJW0 460 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 SCN3AQ9NY46 2000 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 A0A0A6YYD5 115 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 A0A0G2JND7 137 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 TEX51A0A1B0GUA7 166 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 PSMD12O00232 456 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 CHST10O43529 356 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 RAD1O60671 282 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ONECUT2O95948 504 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 GBAP04062 536 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 CD63P08962 238 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ANXA4P09525 319 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 RNH1P13489 461 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 MAPK12P53778 367 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 SHC2P98077 582 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 RUNX2Q13950 521 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 KIAA0040Q15053 153 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 NOXRED1Q6NXP6 359 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 LARP4Q71RC2 724 aaKnown RBP eCLIP14.59□□□□□ -0.07
DDB1-216ENST00000539739 TIPARPQ7Z3E1 657 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 AMER3Q8N944 861 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 OR5T3Q8NGG3 340 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 OR51Q1Q8NH59 317 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ADAMTS18Q8TE60 1221 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 C11orf24Q96F05 449 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 MS4A12Q9NXJ0 267 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 NOP53Q9NZM5 478 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 HCN3Q9P1Z3 774 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 TRPC4Q9UBN4 977 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ZNF282Q9UDV7 671 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 GIMAP2Q9UG22 337 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 PHF11Q9UIL8 331 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 ANGPTL2Q9UKU9 493 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 DAPP1Q9UN19 280 aa14.59□□□□□ -0.07
DDB1-216ENST00000539739 EIF3LQ9Y262 564 aaKnown RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 POLR3HQ9Y535 204 aaPredicted RBP14.59□□□□□ -0.07
DDB1-216ENST00000539739 ALBP02768 609 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 FAM58BPP0C7Q3 252 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 PRR35P0CG20 571 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 ACPPP15309 386 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 ITGAXP20702 1163 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 IL10P22301 178 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 TLX1P31314 330 aaPredicted RBP14.58□□□□□ -0.08
DDB1-216ENST00000539739 GSTM5P46439 218 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 IDH3AP50213 366 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 TRA2BP62995 288 aaKnown RBP14.58□□□□□ -0.08
DDB1-216ENST00000539739 ERVK-8P63133 956 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 OLR1P78380 273 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 MAT1AQ00266 395 aaKnown RBP14.58□□□□□ -0.08
DDB1-216ENST00000539739 OCA2Q04671 838 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 EMX2Q04743 252 aa14.58□□□□□ -0.08
DDB1-216ENST00000539739 MLIPQ5VWP3 458 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms