RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ANKHQ9HCJ1 492 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 DNAJC11Q9NVH1 559 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 C19orf25Q9UFG5 118 aaPredicted RBP14.01□□□□□ -0.17
USB1-203ENST00000539737 PTBP2Q9UKA9 531 aaKnown RBP14.01□□□□□ -0.17
USB1-203ENST00000539737 SLC22A14Q9Y267 594 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 PCDHGB6Q9Y5F9 930 aa14.01□□□□□ -0.17
USB1-203ENST00000539737 NIPBLQ6KC79 2804 aaeCLIP14.01□□□□□ -0.17
USB1-203ENST00000539737 ANKHD1Q8IWZ3 2542 aaKnown RBP14.01□□□□□ -0.17
USB1-203ENST00000539737 KCNE1BA0A087WTH5 132 aa14□□□□□ -0.17
USB1-203ENST00000539737 GABRR3A8MPY1 467 aa14□□□□□ -0.17
USB1-203ENST00000539737 UBXN8O00124 270 aa14□□□□□ -0.17
USB1-203ENST00000539737 RDH16O75452 317 aa14□□□□□ -0.17
USB1-203ENST00000539737 STK16O75716 305 aa14□□□□□ -0.17
USB1-203ENST00000539737 RBP1P09455 135 aa14□□□□□ -0.17
USB1-203ENST00000539737 GNAZP19086 355 aa14□□□□□ -0.17
USB1-203ENST00000539737 HSD17B3P37058 310 aa14□□□□□ -0.17
USB1-203ENST00000539737 XCR1P46094 333 aa14□□□□□ -0.17
USB1-203ENST00000539737 HSPA7P48741 367 aa14□□□□□ -0.17
USB1-203ENST00000539737 OLR1P78380 273 aa14□□□□□ -0.17
USB1-203ENST00000539737 REEP5Q00765 189 aa14□□□□□ -0.17
USB1-203ENST00000539737 PDK4Q16654 411 aa14□□□□□ -0.17
USB1-203ENST00000539737 TECRLQ5HYJ1 363 aa14□□□□□ -0.17
USB1-203ENST00000539737 SPNS3Q6ZMD2 512 aa14□□□□□ -0.17
USB1-203ENST00000539737 Q6ZPB1 254 aaPredicted RBP14□□□□□ -0.17
USB1-203ENST00000539737 TMPRSS11BQ86T26 416 aa14□□□□□ -0.17
USB1-203ENST00000539737 PDSS2Q86YH6 399 aa14□□□□□ -0.17
USB1-203ENST00000539737 TDRPQ86YL5 185 aa14□□□□□ -0.17
USB1-203ENST00000539737 OR4K1Q8NGD4 311 aa14□□□□□ -0.17
USB1-203ENST00000539737 OR5T3Q8NGG3 340 aa14□□□□□ -0.17
USB1-203ENST00000539737 ACMSDQ8TDX5 336 aa14□□□□□ -0.17
USB1-203ENST00000539737 SCMH1Q96GD3 660 aa14□□□□□ -0.17
USB1-203ENST00000539737 GPR78Q96P69 363 aa14□□□□□ -0.17
USB1-203ENST00000539737 DMRTA2Q96SC8 542 aa14□□□□□ -0.17
USB1-203ENST00000539737 AIF1LQ9BQI0 150 aa14□□□□□ -0.17
USB1-203ENST00000539737 SARGQ9BW04 601 aa14□□□□□ -0.17
USB1-203ENST00000539737 MCCC2Q9HCC0 563 aa14□□□□□ -0.17
USB1-203ENST00000539737 NPDC1Q9NQX5 325 aaPredicted RBP14□□□□□ -0.17
USB1-203ENST00000539737 TEKT2Q9UIF3 430 aa14□□□□□ -0.17
USB1-203ENST00000539737 TMCO1Q9UM00 188 aa14□□□□□ -0.17
USB1-203ENST00000539737 PPT2Q9UMR5 302 aa14□□□□□ -0.17
USB1-203ENST00000539737 ASB1Q9Y576 335 aa14□□□□□ -0.17
USB1-203ENST00000539737 HCFC1P51610 2035 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 TRBC2A0A5B9 178 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 FEZF1A0PJY2 475 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 TAPBPO15533 448 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 ASNA1O43681 348 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 CDH16O75309 829 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 NEURL1O76050 574 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 NSA2O95478 260 aaKnown RBP13.99□□□□□ -0.17
USB1-203ENST00000539737 SHBGP04278 402 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 CYC1P08574 325 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 NUDT17P0C025 328 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 GFAPP14136 432 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 EEF1DP29692 281 aaKnown RBP13.99□□□□□ -0.17
USB1-203ENST00000539737 BCL6P41182 706 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 GDF5P43026 501 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 RASA2Q15283 850 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 MAPKAPK3Q16644 382 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 C18orf21Q32NC0 220 aaPredicted RBP13.99□□□□□ -0.17
USB1-203ENST00000539737 SFT2D3Q587I9 215 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 PLAG1Q6DJT9 500 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 PAPD4Q6PIY7 484 aaKnown RBP13.99□□□□□ -0.17
USB1-203ENST00000539737 NXPE4Q6UWF7 544 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 ASPGQ86U10 573 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 ZNF227Q86WZ6 799 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 MFSD9Q8NBP5 474 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 KCT2Q8NC54 265 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 OR51Q1Q8NH59 317 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 THAP3Q8WTV1 239 aaPredicted RBP13.99□□□□□ -0.17
USB1-203ENST00000539737 SLC13A3Q8WWT9 602 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 C14orf79Q96F83 325 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 SCYL1Q96KG9 808 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 UTP23Q9BRU9 249 aaKnown RBP13.99□□□□□ -0.17
USB1-203ENST00000539737 PARD6BQ9BYG5 372 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 CD244Q9BZW8 370 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 ENKD1Q9H0I2 346 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 EHD1Q9H4M9 534 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 CDCP1Q9H5V8 836 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 XPR1Q9UBH6 696 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 RAB21Q9UL25 225 aa13.99□□□□□ -0.17
USB1-203ENST00000539737 ASPDHA6ND91 283 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 CLGNO14967 610 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 CCNT2O60583 730 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 KCNC1P48547 511 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 ART1P52961 327 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 ALDH18A1P54886 795 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 SETDB1Q15047 1291 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 CATSPEREQ5SY80 951 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 NIPAL1Q6NVV3 410 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 H3F3CQ6NXT2 135 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 METTL2BQ6P1Q9 378 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 PLD6Q8N2A8 252 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 MREGQ8N565 214 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 PEX11GQ96HA9 241 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 ZNF354BQ96LW1 612 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 MRPL57Q9BQC6 102 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 PITHD1Q9GZP4 211 aaPredicted RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 MRPL46Q9H2W6 279 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 CPSF2Q9P2I0 782 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms