RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CDK2AP1O14519 115 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 CTNSO60931 367 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 SCELO95171 688 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 UNC5CO95185 931 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 KLHL2O95198 593 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 SP1P08047 785 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 MYBL2P10244 700 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 ATP5A1P25705 553 aaKnown RBP15.65■□□□□ 0.1
DDB1-215ENST00000539712 MAGEA12P43365 314 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 SETDB1Q15047 1291 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 ACAP2Q15057 778 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 HIST2H2ACQ16777 129 aaPredicted RBP15.65■□□□□ 0.1
DDB1-215ENST00000539712 FAM83EQ2M2I3 478 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 C1QL3Q5VWW1 255 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 HIST2H2AA3Q6FI13 130 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 MED27Q6P2C8 311 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 GFRALQ6UXV0 394 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 TEX9Q8N6V9 391 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 ACOT4Q8N9L9 421 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 ARMC2Q8NEN0 867 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 SLC44A1Q8WWI5 657 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 ISL2Q96A47 359 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 FRMD6Q96NE9 622 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 KCNC2Q96PR1 638 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 MAPKAP1Q9BPZ7 522 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 TBCDQ9BTW9 1192 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 CDC42EP4Q9H3Q1 356 aaKnown RBP15.65■□□□□ 0.1
DDB1-215ENST00000539712 LYRM4Q9HD34 91 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 PNO1Q9NRX1 252 aaKnown RBP15.65■□□□□ 0.1
DDB1-215ENST00000539712 ZNF358Q9NW07 568 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 LRFN1Q9P244 771 aa15.65■□□□□ 0.1
DDB1-215ENST00000539712 A0A088AWK7 358 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 TRBV11-1A0A0K0K1C0 115 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 MYOCOSA0A1B0GUC4 107 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 SYCE1LA8MT33 242 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 CLDN4O14493 209 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 PRKNO60260 465 aaPredicted RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 SH3BGRLO75368 114 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 ACSL3O95573 720 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 TGFB1P01137 390 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 CD46P15529 392 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 EPB42P16452 691 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 ZNF10P21506 573 aaPredicted RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 HPDP32754 393 aaPredicted RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 HLCSP50747 726 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 ALDH18A1P54886 795 aaKnown RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 OC90Q02509 493 aaPredicted RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 SLC13A2Q13183 592 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 PCBP2Q15366 365 aaKnown RBP eCLIP15.64■□□□□ 0.09
DDB1-215ENST00000539712 UAP1Q16222 522 aaPredicted RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 PFKFB4Q16877 469 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 TMEM35AQ53FP2 167 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 RNFT1Q5M7Z0 435 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 GRHL2Q6ISB3 625 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 SLC25A25Q6KCM7 469 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 GALNTL5Q7Z4T8 443 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 CLNKQ7Z7G1 428 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 SIAH3Q8IW03 269 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 ADAMTS18Q8TE60 1221 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 PTPMT1Q8WUK0 201 aaPredicted RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 ZNF592Q92610 1267 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 UBE2E3Q969T4 207 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 SORBS1Q9BX66 1292 aaKnown RBP15.64■□□□□ 0.09
DDB1-215ENST00000539712 DEFB126Q9BYW3 111 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 OR51B5Q9H339 312 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 SEC14L3Q9UDX4 400 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 TSC22D4Q9Y3Q8 395 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 ADGRG4Q8IZF6 3080 aa15.64■□□□□ 0.09
DDB1-215ENST00000539712 DCHS2Q6V1P9 2916 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 SAP18O00422 153 aaKnown RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 NME2P1O60361 137 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 ZG16O60844 167 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 SIX3O95343 332 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 NME2P22392 152 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 HIST1H1TP22492 207 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 TYK2P29597 1187 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 EEF1DP29692 281 aaKnown RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 PHBP35232 272 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 SERPINB8P50452 374 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 TGM3Q08188 693 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 ZRSR2Q15696 482 aaKnown RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 TECRLQ5HYJ1 363 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 DEPDC1Q5TB30 811 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 KHDRBS2Q5VWX1 349 aaKnown RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 C16orf47Q6ZP98 133 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 FJX1Q86VR8 437 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 HUS1BQ8NHY5 278 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 THAP3Q8WTV1 239 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 IFT81Q8WYA0 676 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 NCLNQ969V3 563 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 ANKRD9Q96BM1 317 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 ZNF717Q9BY31 904 aaPredicted RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 ADAP2Q9NPF8 381 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 VTI1BQ9UEU0 232 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 MTRF1LQ9UGC7 380 aaKnown RBP15.63■□□□□ 0.09
DDB1-215ENST00000539712 PCNX1Q96RV3 2341 aa15.63■□□□□ 0.09
DDB1-215ENST00000539712 A0A1B0GUH1 482 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 SLC25A12O75746 678 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 PCNAP12004 261 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms