RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ATMQ13315 3056 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 ACACAQ13085 2346 aa12.27□□□□□ -0.45
CCDC42-202ENST00000539522 SPENQ96T58 3664 aaKnown RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 WASHC1A8K0Z3 465 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 NPIPB8E9PQR5 432 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 CYR61O00622 381 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 PIP5K1BO14986 540 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 CCDC22O60826 627 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 PRKRAO75569 313 aaKnown RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 CRCPO75575 148 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 SEMA3DO95025 777 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 BMP10O95393 424 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 KRT6AP02538 564 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 KRT6BP04259 564 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 KLK3P07288 261 aaPredicted RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 CCNYL3P0C7X3 344 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 LINC00032P0C843 101 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 FBLP22087 321 aaKnown RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 HIST1H1TP22492 207 aaPredicted RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 PTPN4P29074 926 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 HMOX2P30519 316 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 KRT6CP48668 564 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 LIM2P55344 173 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 HNRNPH2P55795 449 aaKnown RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 NDUFA9Q16795 377 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 ARHGAP40Q5TG30 622 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 MLIPQ5VWP3 458 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 METTL21CQ5VZV1 264 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 MED25Q71SY5 747 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 ABHD13Q7L211 337 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 STT3BQ8TCJ2 826 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 TWIST2Q8WVJ9 160 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 COL26A1Q96A83 441 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 FKBP10Q96AY3 582 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 PEX11GQ96HA9 241 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 KCNC2Q96PR1 638 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 LRRC37BQ96QE4 947 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 SERPINI1Q99574 410 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 MAPKAP1Q9BPZ7 522 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 CCDC28BQ9BUN5 200 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 RBCK1Q9BYM8 510 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 DPH1Q9BZG8 443 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 SLC7A5P2Q9GIP4 190 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 TGIF2Q9GZN2 237 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 SOX17Q9H6I2 414 aaPredicted RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 IFT80Q9P2H3 777 aaPredicted RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 TCFL5Q9UL49 500 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 ZMIZ1Q9ULJ6 1067 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 DAPP1Q9UN19 280 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 SLC12A4Q9UP95 1085 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 FARSAQ9Y285 508 aaKnown RBP12.26□□□□□ -0.45
CCDC42-202ENST00000539522 MAP4K5Q9Y4K4 846 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 ASB4Q9Y574 426 aa12.26□□□□□ -0.45
CCDC42-202ENST00000539522 URB1O60287 2271 aaKnown RBP12.25□□□□□ -0.45
CCDC42-202ENST00000539522 TMEM8BA6NDV4 472 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 C21orf140B9A014 251 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
CCDC42-202ENST00000539522 NKX2-8O15522 239 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 DIAPH2O60879 1101 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 CHEK2O96017 543 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ALBP02768 609 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ZGLP1P0C6A0 271 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 HSD3B1P14060 373 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 PRPH2P23942 346 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 HSD3B2P26439 372 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 XCR1P46094 333 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 AVPR1BP47901 424 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ARFIP1P53367 373 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 RHAGQ02094 409 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 BTKQ06187 659 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ZNF33BQ06732 778 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 KLC1Q07866 573 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 PRSS53Q2L4Q9 553 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 C10orf62Q5T681 223 aaPredicted RBP12.25□□□□□ -0.45
CCDC42-202ENST00000539522 TRIM40Q6P9F5 258 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ACAD11Q709F0 780 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 CHSY3Q70JA7 882 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 TRPM8Q7Z2W7 1104 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 COMMD6Q7Z4G1 85 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 MMP21Q8N119 569 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ZCCHC7Q8N3Z6 543 aaKnown RBP12.25□□□□□ -0.45
CCDC42-202ENST00000539522 C1orf52Q8N6N3 182 aaKnown RBP12.25□□□□□ -0.45
CCDC42-202ENST00000539522 IL22RA1Q8N6P7 574 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 RGMAQ96B86 450 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 FCRL1Q96LA6 429 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 SERINC2Q96SA4 455 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 TBCDQ9BTW9 1192 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 WDR54Q9H977 334 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 CPNE5Q9HCH3 593 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 SIRT5Q9NXA8 310 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 TRPC4Q9UBN4 977 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 VPS29Q9UBQ0 182 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 EXO1Q9UQ84 846 aaKnown RBP12.25□□□□□ -0.45
CCDC42-202ENST00000539522 ATG4BQ9Y4P1 393 aa12.25□□□□□ -0.45
CCDC42-202ENST00000539522 KMT2BQ9UMN6 2715 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 A0A1W2PR48 441 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 A0A1W2PS29 197 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 MASP2O00187 686 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 VPS4BO75351 444 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms