RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 CDKL1Q00532 357 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 SLC13A2Q13183 592 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 RUNX2Q13950 521 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 RCN2Q14257 317 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 ELAVL1Q15717 326 aaKnown RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 PPP1R3AQ16821 1122 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 GXYLT1Q4G148 440 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 NDUFAF5Q5TEU4 345 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 FAM45BPQ6NSW5 357 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 IL20RBQ6UXL0 311 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 B3GNT6Q6ZMB0 384 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 TRILQ7L0X0 811 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.54□□□□□ -1.2
CD4-209ENST00000539492 ZNF595Q8IYB9 648 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 TMEM132CQ8N3T6 1108 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 FAM109AQ8N4B1 249 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 CHDHQ8NE62 594 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 OR10Q1Q8NGQ4 319 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 OR14A16Q8NHC5 309 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 FAM45AQ8TCE6 357 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 DAZLQ92904 295 aaKnown RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 CERS2Q96G23 380 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 PBKQ96KB5 322 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 SGCZQ96LD1 299 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 RASL10BQ96S79 203 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 FOXC2Q99958 501 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 CXXC4Q9H2H0 198 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 PNPLA3Q9NST1 481 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 MYOTQ9UBF9 498 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 IKZF3Q9UKT9 509 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 SLC22A14Q9Y267 594 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 HEATR5AQ86XA9 2040 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 A0A0G2JN53 185 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 A0A1B0GVC2 190 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 LRIT2A6NDA9 550 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 NPEPPSL1A6NEC2 478 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 FAM47E-STBD1D6RA91 191 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 PGRMC1O00264 195 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 AQP7O14520 342 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 NRDCO43847 1150 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 WDR1O75083 606 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 H2AFYO75367 372 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 BANF1O75531 89 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 GLI4P10075 376 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 ZNF37AP17032 561 aaPredicted RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 GNAZP19086 355 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 SAT1P21673 171 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 HNRNPH1P31943 449 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 SOX3P41225 446 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 HNMTP50135 292 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 NR0B1P51843 470 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 HNRNPFP52597 415 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 HK2P52789 917 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 PGGT1BP53609 377 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 PPP1R7Q15435 360 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 SLC25A35Q3KQZ1 300 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 XKR6Q5GH73 641 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 TEDDM1Q5T9Z0 273 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 ZNF585AQ6P3V2 769 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 TMIGD1Q6UXZ0 262 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 HSDL2Q6YN16 418 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 C16orf47Q6ZP98 133 aaPredicted RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 RTL4Q6ZR62 310 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 CLNKQ7Z7G1 428 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 GAS2L3Q86XJ1 694 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 TGIF2LYQ8IUE0 185 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 KLHDC8AQ8IYD2 350 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 KRT78Q8N1N4 520 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 TMEM251Q8N6I4 163 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 FAM47BQ8NA70 645 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 GOLM1Q8NBJ4 401 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 MORN4Q8NDC4 146 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 TMEM52Q8NDY8 209 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 OR5M9Q8NGP3 310 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 OR8K3Q8NH51 312 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 CCT6BQ92526 530 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 ANKRD7Q92527 254 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 NRGNQ92686 78 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 MS4A6EQ96DS6 147 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 SCYL1Q96KG9 808 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 QRFPRQ96P65 431 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 EGFL8Q99944 293 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 FAM173AQ9BQD7 235 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 TTYH2Q9BSA4 534 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 PITHD1Q9GZP4 211 aaPredicted RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 LIN28AQ9H9Z2 209 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 IL1RL2Q9HB29 575 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 PPANQ9NQ55 473 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 DNAJB12Q9NXW2 375 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 SLC17A6Q9P2U8 582 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 L3MBTL1Q9Y468 752 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 OARD1Q9Y530 152 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 FAM215AQ9Y5M1 114 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 LIPGQ9Y5X9 500 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 CLCA3PQ9Y6N3 262 aa7.53□□□□□ -1.2
CD4-209ENST00000539492 FN1P02751 2386 aaKnown RBP7.53□□□□□ -1.2
CD4-209ENST00000539492 DNHD1Q96M86 4753 aa7.52□□□□□ -1.21
CD4-209ENST00000539492 A0A0G2JNJ9 132 aa7.52□□□□□ -1.21
CD4-209ENST00000539492 GOLGA6L10A0A0M3HER8 536 aa7.52□□□□□ -1.21
CD4-209ENST00000539492 G3V3Y1 287 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms