RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PLPPR4Q7Z2D5 763 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 CROCCP3Q8IVE0 287 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 XXYLT1Q8NBI6 393 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 KCTD6Q8NC69 237 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 ZNF564Q8TBZ8 553 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-209ENST00000539197 LIPHQ8WWY8 451 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 ZNF558Q96NG5 402 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 FZD8Q9H461 694 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 RAB9BQ9NP90 201 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 SH3GLB2Q9NR46 395 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 MRGBPQ9NV56 204 aa3.24□□□□□ -1.89
CCDC7-209ENST00000539197 TRAV18A0A075B6X5 111 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 PRSS46E5RG02 174 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 SAP18O00422 153 aaKnown RBP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 CALCAP01258 141 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 FYNP06241 537 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 TCF4P15884 667 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 ERCC2P18074 760 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 HSPA4P34932 840 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 TNFRSF4P43489 277 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 FNTAP49354 379 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 TAZQ16635 292 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 RFTN2Q52LD8 501 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 CCDC71Q8IV32 467 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 FAM219AQ8IW50 185 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 ZNF781Q8N8C0 355 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 NFAM1Q8NET5 270 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 OR2L5Q8NG80 312 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 GRK7Q8WTQ7 553 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 PGAP3Q96FM1 320 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 GTPBP2Q9BX10 602 aaKnown RBP3.23□□□□□ -1.89
CCDC7-209ENST00000539197 FN3KQ9H479 309 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 C5orf66Q9H5L9 145 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 C10orf88Q9H8K7 445 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 ABCG2Q9UNQ0 655 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 MOKQ9UQ07 419 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 NCKAP1Q9Y2A7 1128 aa3.23□□□□□ -1.89
CCDC7-209ENST00000539197 A0A1W2PPW3 197 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 TMEM150CB9EJG8 249 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 PANO1I0J062 215 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 P0C879 139 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 IL11P20809 199 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 EEF1DP29692 281 aaKnown RBP3.22□□□□□ -1.89
CCDC7-209ENST00000539197 OR3A3P47888 321 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 WNT4P56705 351 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 RBPMS2Q6ZRY4 209 aaKnown RBP3.22□□□□□ -1.89
CCDC7-209ENST00000539197 PCGF5Q86SE9 256 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 CAMKVQ8NCB2 501 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 OR6J1Q8NGC5 347 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 FAM104AQ969W3 186 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 DPEP2Q9H4A9 486 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 RABEP2Q9H5N1 569 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 ZNF446Q9NWS9 450 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CCDC7-209ENST00000539197 ARID1AO14497 2285 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 PGRMC2O15173 223 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 ACAT1P24752 427 aaKnown RBP3.21□□□□□ -1.9
CCDC7-209ENST00000539197 RAD52P43351 418 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 ALDH3B1P43353 468 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 PPA1Q15181 289 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 MAPK11Q15759 364 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 C17orf58Q2M2W7 97 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 SLC30A6Q6NXT4 461 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 GPR141Q7Z602 305 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 NRARPQ7Z6K4 114 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 FBXO16Q8IX29 292 aaPredicted RBP3.21□□□□□ -1.9
CCDC7-209ENST00000539197 ENTHD1Q8IYW4 607 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 SLC22A18ASQ8N1D0 253 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 SMPDL3AQ92484 453 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 MRPS27Q92552 414 aaKnown RBP3.21□□□□□ -1.9
CCDC7-209ENST00000539197 RMDN1Q96DB5 314 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 RBM18Q96H35 190 aaKnown RBP3.21□□□□□ -1.9
CCDC7-209ENST00000539197 RMDN2Q96LZ7 410 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 KCNMB3Q9NPA1 279 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 SH3GLB1Q9Y371 365 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 TTLL3Q9Y4R7 772 aa3.21□□□□□ -1.9
CCDC7-209ENST00000539197 ZNF732B4DXR9 585 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 TCP11X1B4DZS4 312 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 P4HA2O15460 535 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 SLC25A1P53007 311 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 PRKCEQ02156 737 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 CNTN1Q12860 1018 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 RASA2Q15283 850 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 TOMM20Q15388 145 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 CHST3Q7LGC8 479 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 HES7Q9BYE0 225 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 NACAP1Q9BZK3 213 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 RCOR3Q9P2K3 495 aaPredicted RBP3.2□□□□□ -1.9
CCDC7-209ENST00000539197 WDR35Q9P2L0 1181 aa3.2□□□□□ -1.9
CCDC7-209ENST00000539197 EPOPA6NHQ4 379 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 ZNF724A8MTY0 619 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 FGF19O95750 216 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 ADRB2P07550 413 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 PRKAR2BP31323 418 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 KRT20P35900 424 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 RGS7P49802 495 aa3.19□□□□□ -1.9
CCDC7-209ENST00000539197 STX17P56962 302 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms