RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	STK38L	Q9Y2H1	464 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CLDN16	Q9Y5I7	305 aa		11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	COPG1	Q9Y678	874 aa	Known RBP	11.54	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SPTBN1	Q01082	2364 aa	Known RBP	11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OR5H15	A6NDH6	313 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828		H3BQF6	201 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CDC123	O75794	336 aa	Predicted RBP	11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	B3GALT4	O96024	378 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OTC	P00480	354 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	EEF1D	P29692	281 aa	Known RBP	11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PPP2R1B	P30154	601 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CCNG1	P51959	295 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OLR1	P78380	273 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	BTG2	P78543	158 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF33B	Q06732	778 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	IGFBP7	Q16270	282 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ACER2	Q5QJU3	275 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OR4C11	Q6IEV9	310 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SLC22A9	Q8IVM8	553 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SIRT6	Q8N6T7	355 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HORMAD2	Q8N7B1	307 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	NFAM1	Q8NET5	270 aa	Predicted RBP	11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DNAJB8	Q8NHS0	232 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SUN3	Q8TAQ9	357 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MZB1	Q8WU39	189 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CCDC126	Q96EE4	140 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SCYL1	Q96KG9	808 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SERPINI1	Q99574	410 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DDX31	Q9H8H2	851 aa	Known RBP	11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	KCNK13	Q9HB14	408 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ADAP2	Q9NPF8	381 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	NECTIN3	Q9NQS3	549 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	VTI1B	Q9UEU0	232 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PHF11	Q9UIL8	331 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ADAM29	Q9UKF5	820 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SVIL	O95425	2214 aa		11.53	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SIX3	O95343	332 aa	Predicted RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	WDPCP	O95876	746 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TGFB1	P01137	390 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SBK3	P0C264	359 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PCNA	P12004	261 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CERS1	P27544	350 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GPR143	P51810	404 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HERVK_113	P63132	956 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	IGLV3-21	P80748	117 aa	Predicted RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TRAF3	Q13114	568 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ELAVL1	Q15717	326 aa	Known RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TEX35	Q5T0J7	233 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FRG2	Q64ET8	278 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ADNP2	Q6IQ32	1131 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF793	Q6ZN11	406 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LINC00696	Q6ZRV3	163 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZGRF1	Q86YA3	2104 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM132C	Q8N3T6	1108 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RIBC1	Q8N443	379 aa	Predicted RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	APCDD1L	Q8NCL9	501 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	B3GNT7	Q8NFL0	401 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR8K3	Q8NH51	312 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	UHMK1	Q8TAS1	419 aa	Known RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF483	Q8TF39	744 aa	Predicted RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAR1	Q8WVX9	515 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DAZL	Q92904	295 aa	Known RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ATP6V1E2	Q96A05	226 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PHF21B	Q96EK2	531 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FRG2B	Q96QU4	278 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ERVK-6	Q9BXR3	956 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NOL11	Q9H8H0	719 aa	Known RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	BRF2	Q9HAW0	419 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZBTB26	Q9HCK0	441 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LYAR	Q9NX58	379 aa	Known RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SPTAN1	Q13813	2472 aa	Known RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	USP9Y	O00507	2555 aa	Predicted RBP	11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DOPEY2	Q9Y3R5	2298 aa		11.52	□□□□□ -0.57
CLTCL1-205	ENST00000538828	IGHV3-20	A0A0C4DH32	117 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR2W5	A6NFC9	320 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828		A8MT66	165 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAM227A	F5H4B4	570 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PLPP1	O14494	284 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR7A17	O14581	309 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PRAMEF2	O60811	474 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CDH16	O75309	829 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CBX6	O95503	412 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MLYCD	O95822	493 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	UQCRH	P07919	91 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CELA2A	P08217	269 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HSD3B1	P14060	373 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	IMPDH1	P20839	514 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MAOA	P21397	527 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ATP5F1	P24539	256 aa	Predicted RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HSD3B2	P26439	372 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TLX1	P31314	330 aa	Predicted RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GALNS	P34059	522 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TRHR	P34981	398 aa	Predicted RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SSR2	P43308	183 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CLCN2	P51788	898 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RAP1GDS1	P52306	607 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SLC13A2	Q13183	592 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZRSR2	Q15696	482 aa	Known RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.51	□□□□□ -0.57

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