RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TLR4O00206 839 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 PRKD3O94806 890 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 SOX14O95416 240 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 IFI30P13284 250 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 ACSL1P33121 698 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 RORAP35398 523 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 CLDN10P78369 228 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 EMX2Q04743 252 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 TUBB3Q13509 450 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 SGCAQ16586 387 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 B3GNT6Q6ZMB0 384 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 OR2L3Q8NG85 312 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 HUS1BQ8NHY5 278 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 FANK1Q8TC84 345 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 HSPBAP1Q96EW2 488 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 CHCHD6Q9BRQ6 235 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 STRA6Q9BX79 667 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 TIGARQ9NQ88 270 aa5.15□□□□□ -1.59
LRP6-203ENST00000538239 TNRC6CQ9HCJ0 1690 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 A0A1W2PQ72 361 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 C1orf226A1L170 272 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 H7C0S8 307 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 RPS3AP61247 264 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 PPP1R8Q12972 351 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 ABRAXAS2Q15018 415 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 QPRTQ15274 297 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 TCTE1Q5JU00 501 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 IDNKQ5T6J7 187 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 LIPIQ6XZB0 460 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 UTS2BQ765I0 119 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 LAPTM4BQ86VI4 370 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 TMEM173Q86WV6 379 aaPredicted RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 RAB43Q86YS6 212 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 KLHDC8AQ8IYD2 350 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 MDGA1Q8NFP4 955 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 OR5L2Q8NGL0 311 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 C10orf82Q8WW14 230 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 TMEM234Q8WY98 164 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 MOAP1Q96BY2 351 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 RADILQ96JH8 1075 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 HSH2DQ96JZ2 352 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ZNF778Q96MU6 729 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 IL4I1Q96RQ9 567 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ZFYVE21Q9BQ24 234 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 CRB3Q9BUF7 120 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 UBE2ZQ9H832 354 aaPredicted RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 PREBQ9HCU5 417 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ATXN7L1Q9ULK2 861 aaPredicted RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 MAN2B2Q9Y2E5 1009 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 COMMD3-BMI1R4GMX3 469 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 STRCP1A6NGW2 1772 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 A0A1B0GUL6 1792 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 SLC9B1P1A6NJY1 282 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 BRINP1O60477 761 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 RCBTB2O95199 551 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 PORP16435 677 aaPredicted RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 HOXD9P28356 352 aaPredicted RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 TIA1P31483 386 aaKnown RBP eCLIP5.14□□□□□ -1.592e-7■■■■□ 21.6
LRP6-203ENST00000538239 CD68P34810 354 aaPredicted RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 HMGCLP35914 325 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 SGSHP51688 502 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 EEF1A2Q05639 463 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 SMCO1Q147U7 214 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 SYT16Q17RD7 645 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 KLHL26Q53HC5 615 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 KLHDC10Q6PID8 442 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 YTHDF3Q7Z739 585 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 GALNT12Q8IXK2 581 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 POC5Q8NA72 575 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 CLEC1AQ8NC01 280 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ACVR1CQ8NER5 493 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 TMIEQ8NEW7 156 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 OR56A3Q8NH54 315 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ARRDC3Q96B67 414 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 TRIB3Q96RU7 358 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 CD180Q99467 661 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 EHD1Q9H4M9 534 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 GNG8Q9UK08 70 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 A0A0J9YY10 115 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ZNF670-ZNF695F2Z2N8 137 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 CD2P06729 351 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 HLA-FP30511 346 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 FAUP35544 74 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 GMPRP36959 345 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 ARSFP54793 590 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 WDR4P57081 412 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 RAB25P57735 213 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 RPS26P62854 115 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 ZNF252P-AS1Q0IIN9 211 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 KLHL22Q53GT1 634 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 SLC35F1Q5T1Q4 408 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 IKBIPQ70UQ0 350 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 SLCO6A1Q86UG4 719 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 PRR22Q8IZ63 422 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 PDPRQ8NCN5 879 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 POLDIP3Q9BY77 421 aaKnown RBP5.14□□□□□ -1.59
LRP6-203ENST00000538239 C14orf105Q9NVL8 296 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 NFS1Q9Y697 457 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 PRSS51A0A1B0GVH4 220 aa5.14□□□□□ -1.59
LRP6-203ENST00000538239 H3BNC9 293 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms