RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SIGLEC11Q96RL6 698 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 DDIT4Q9NX09 232 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 GPR83Q9NYM4 423 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SLAMF8Q9P0V8 285 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CDK5RAP2Q96SN8 1893 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 KCNK1O00180 336 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CBX7O95931 251 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 EPOP01588 193 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 OGNP20774 298 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 NNMTP40261 264 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 IDH2P48735 452 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 HNRNPA0Q13151 305 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CDH18Q13634 790 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 COQ8AQ8NI60 647 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 UCN3Q969E3 161 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 LRRC46Q96FV0 321 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SHDQ96IW2 340 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC38A2Q96QD8 506 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 BBS4Q96RK4 519 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PITX2Q99697 317 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SPON2Q9BUD6 331 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC29A3Q9BZD2 475 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 NMUR1Q9HB89 426 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ABCC13Q9NSE7 274 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SCP2D1Q9UJQ7 156 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ENTPD4Q9Y227 616 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 DTX4Q9Y2E6 619 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PTGDR2Q9Y5Y4 395 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 STMND1H3BQB6 276 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 M0QYT0 321 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 DNASE2O00115 360 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SSNA1O43805 119 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 CREG1O75629 220 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ERCC2P18074 760 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 NUDT6P53370 316 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PTPN5P54829 565 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 RNF219Q5W0B1 726 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 WSCD1Q658N2 575 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 NCBP2-AS2Q69YL0 99 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 MIB1Q86YT6 1006 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 FTMTQ8N4E7 242 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 OR2T4Q8NH00 348 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ZFP42Q96MM3 310 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM209Q96SK2 561 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 SPRTNQ9H040 489 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 FZD8Q9H461 694 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF334Q9HCZ1 680 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 PRMT8Q9NR22 394 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 MED11Q9P086 117 aa10.45□□□□□ -0.74
CLSTN3-207ENST00000537408 ADAM12O43184 909 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 RLN2P04090 185 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SSTR4P31391 388 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ERVK-25P63136 954 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 MADCAM1Q13477 382 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 CAMK2GQ13555 558 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 C1DQ13901 141 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 BCL2L15Q5TBC7 163 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 HTR3DQ70Z44 454 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 GPR155Q7Z3F1 870 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 HSD17B13Q7Z5P4 300 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ZFAND4Q86XD8 727 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC44A2Q8IWA5 706 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 OR4F6Q8NGB9 312 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 PGLYRP2Q96PD5 576 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 C1QTNF6Q9BXI9 259 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ABCG4Q9H172 646 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 LINC01553A4QN01 128 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 EIF1BO60739 113 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 CST3P01034 146 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 EIF1P41567 113 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 CLCN5P51795 746 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 OPCMLQ14982 345 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 NKG7Q16617 165 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 UNC50Q53HI1 259 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 RTP2Q5QGT7 225 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 MZT2AQ6P582 158 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 GPR152Q8TDT2 470 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 PGAP3Q96FM1 320 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 OR2M2Q96R28 347 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ZFP64Q9NPA5 681 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 LATS2Q9NRM7 1088 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 DCAF13Q9NV06 445 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 FBXO10Q9UK96 956 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 A8MXK9 166 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF670-ZNF695F2Z2N8 137 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 LGALS8O00214 317 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 UBFD1O14562 309 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 GPX5O75715 221 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 CCNDBP1O95273 360 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 C9P02748 559 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ACADLP28330 430 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC19A1P41440 591 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 PCID2Q5JVF3 399 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 MLIPQ5VWP3 458 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 METAP1DQ6UB28 335 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 KDELC2Q7Z4H8 507 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms