RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 STYXQ8WUJ0 223 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GGHQ92820 318 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TCEAL3Q969E4 200 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MFSD14AQ96MC6 490 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DDOQ99489 341 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C7orf50Q9BRJ6 194 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 C1QTNF2Q9BXJ5 285 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SAP130Q9H0E3 1048 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC28A3Q9HAS3 691 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SPHK1Q9NYA1 384 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ERAP1Q9NZ08 941 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CLEC2DQ9UHP7 191 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ADAM30Q9UKF2 790 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 FBXL21Q9UKT6 434 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ING4Q9UNL4 249 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DNAJC15Q9Y5T4 150 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C17orf113A0A1B0GUU1 675 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GSAPA4D1B5 854 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 A8MT66 165 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TARM1B6A8C7 271 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 I6L893 689 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 J3QL48 77 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SULT1C2O00338 296 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PRAMEF1O95521 474 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 IGF2P01344 180 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 VTNP04004 478 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NMBP08949 121 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TRAPPC2P0DI81 140 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TRAPPC2BP0DI82 140 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RAP2AP10114 183 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CYBAP13498 195 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ACPPP15309 386 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PDGFRAP16234 1089 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ATP5F1P24539 256 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 DNASE1P24855 282 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PRKAR1BP31321 381 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CAP2P40123 477 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RECQLP46063 649 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 CCR6P51684 374 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 HK3P52790 923 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SP4Q02446 784 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 OC90Q02509 493 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 ST3GAL4Q11206 333 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ASAH1Q13510 395 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DMC1Q14565 340 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 UGCGQ16739 394 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 FAM98BQ52LJ0 330 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 KLHL22Q53GT1 634 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PABPC1L2AQ5JQF8 200 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 FAM102AQ5T9C2 384 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 ELP2Q6IA86 826 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DLK2Q6UY11 383 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 USP53Q70EK8 1073 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 BTN2A1Q7KYR7 527 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 EIF3MQ7L2H7 374 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 KRT74Q7RTS7 529 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GPR155Q7Z3F1 870 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 Q8N402 240 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MINDY1Q8N5J2 469 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DEFB123Q8N688 67 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ARL6IP6Q8N6S5 226 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MDGA1Q8NFP4 955 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RAD51AP1Q96B01 352 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C3orf49Q96BT1 292 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RHBDF1Q96CC6 855 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 COL21A1Q96P44 957 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC38A3Q99624 504 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 P2RY13Q9BPV8 354 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RBM4BQ9BQ04 359 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 RBM4Q9BWF3 364 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 NIFKQ9BYG3 293 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 NKX6-2Q9C056 277 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 CHRDQ9H2X0 955 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PRO1933Q9H354 126 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MVB12BQ9H7P6 319 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 AGO3Q9H9G7 860 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 MEAF6Q9HAF1 191 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NKIRAS2Q9NYR9 191 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 OR6C2Q9NZP2 312 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CFAP97Q9P2B7 532 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PISDQ9UG56 409 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 BTNL2Q9UIR0 455 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C3orf18Q9UK00 162 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MAB21L2Q9Y586 359 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DNAH12Q6ZR08 3092 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 A0A087WZ62 844 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 A0A1B0GWJ7 208 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 E9PI62 339 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 HNRNPDLO14979 420 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 LYRM1O43325 122 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GATCO43716 136 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 ADAMTS4O75173 837 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SEMA7AO75326 666 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CLN5O75503 358 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CABYRO75952 493 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 UBXN7O94888 489 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ZNF682O95780 498 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC25A27O95847 323 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 POLBP06746 335 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC2A2P11168 524 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms