RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 KANK2Q63ZY3 851 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 LIX1LQ8IVB5 337 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 ZDHHC21Q8IVQ6 265 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 CHST14Q8NCH0 376 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 GPR26Q8NDV2 337 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 OR6C4Q8NGE1 309 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 MYDGFQ969H8 173 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 EGFL8Q99944 293 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 MTG2Q9H4K7 406 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 BRD7Q9NPI1 651 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 H7C0S8 307 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 PER2O15055 1255 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 NDUFA2O43678 99 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 FGBP02675 491 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 HLA-DMAP28067 261 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 PIK3CGP48736 1102 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 CLCN4P51793 760 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 SNRPD1P62314 119 aaKnown RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 SLC35F1Q5T1Q4 408 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 SPATA19Q7Z5L4 167 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 ADGRG2Q8IZP9 1017 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 STK40Q8N2I9 435 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 PROKR1Q8TCW9 393 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 ZNF431Q8TF32 576 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 TSPEARQ8WU66 669 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 SKA2Q8WVK7 121 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 ISG20Q96AZ6 181 aaKnown RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 ASPNQ9BXN1 380 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 P2RY12Q9H244 342 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 SPNS1Q9H2V7 528 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 IFT46Q9NQC8 304 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 PCTPQ9UKL6 214 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 DHRS7Q9Y394 339 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 SMIM30A4D0T7 59 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 FABP12A6NFH5 140 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 FABP7O15540 132 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 FGF4P08620 206 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 IDH2P48735 452 aaKnown RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 RPA4Q13156 261 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 CPZQ66K79 652 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 ZNF366Q8N895 744 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 POF1BQ8WVV4 589 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 BADQ92934 168 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 DIRAS2Q96HU8 199 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 MS4A7Q9GZW8 240 aaPredicted RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 IKZF5Q9H5V7 419 aa13.4□□□□□ -0.26
LIG1-203ENST00000536218 NSUN3Q9H649 340 aaKnown RBP13.4□□□□□ -0.26
LIG1-203ENST00000536218 WWP2O00308 870 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 MYL12BO14950 172 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 RFPL3O75679 317 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 RPS17P08708 135 aaKnown RBP13.39□□□□□ -0.27
LIG1-203ENST00000536218 MYL12AP19105 171 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 RPS19P39019 145 aaKnown RBP13.39□□□□□ -0.27
LIG1-203ENST00000536218 GNPDA1P46926 289 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 HSPA7P48741 367 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 ASAH1Q13510 395 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 TBCEQ15813 527 aaPredicted RBP13.39□□□□□ -0.27
LIG1-203ENST00000536218 WSCD2Q2TBF2 565 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 SAXO2Q658L1 398 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 TIGD3Q6B0B8 471 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 CRTC1Q6UUV9 634 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 ENTHD1Q8IYW4 607 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 CYB5D2Q8WUJ1 264 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 HYLS1Q96M11 299 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 GORASP2Q9H8Y8 452 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 IL23AQ9NPF7 189 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 MALT1Q9UDY8 824 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 FAM240BA0A1B0GVZ2 78 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 OR5K4A6NMS3 321 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 EFCAB14O75071 495 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 MTX2O75431 263 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 CSF3P09919 207 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 CPN2P22792 545 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 KLHL12Q53G59 568 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 ABI3BPQ7Z7G0 1075 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 RBFAQ8N0V3 343 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 CPXM2Q8N436 756 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 OR56A4Q8NGH8 313 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 NETO1Q8TDF5 533 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 APH1BQ8WW43 257 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 KCNC2Q96PR1 638 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 SUV39H2Q9H5I1 410 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
LIG1-203ENST00000536218 ABCG2Q9UNQ0 655 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 ZNF175Q9Y473 711 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms