RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MYZAPP0CAP1 466 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 DHRS4L1P0CG22 281 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 IL10P22301 178 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 RAP1GDS1P52306 607 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 HNRNPH2P55795 449 aaKnown RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 SKP1P63208 163 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 PHEXP78562 749 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 TGM3Q08188 693 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 GALNT1Q10472 559 aaPredicted RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 TBL3Q12788 808 aaKnown RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 SLAMF1Q13291 335 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 PARP9Q8IXQ6 854 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 TMEM102Q8N9M5 508 aaPredicted RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 SRFBP1Q8NEF9 429 aaKnown RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 FDCSPQ8NFU4 85 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 SLC39A7Q92504 469 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 NACC2Q96BF6 587 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 WBP1Q96G27 269 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 IP6K3Q96PC2 410 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 SERPINI1Q99574 410 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 ZNF700Q9H0M5 742 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 DDX31Q9H8H2 851 aaKnown RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 ZNF395Q9H8N7 513 aaPredicted RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 COPS7BQ9H9Q2 264 aaPredicted RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 MLXIPLQ9NP71 852 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 KCNK9Q9NPC2 374 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 ZNF71Q9NQZ8 489 aaPredicted RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 MID2Q9UJV3 735 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 FBXW2Q9UKT8 454 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 SLC12A4Q9UP95 1085 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 ACTL7BQ9Y614 415 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 SMG1Q96Q15 3661 aaKnown RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 SEC24DO94855 1032 aaPredicted RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 ENO1P06733 434 aaKnown RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 PPP2R1BP30154 601 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 HPDP32754 393 aaPredicted RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 SERPINB4P48594 390 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 MAGOHP61326 146 aaKnown RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 HMGCS1Q01581 520 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 NSDHLQ15738 373 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 C18orf63Q68DL7 685 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 CLEC6AQ6EIG7 209 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 MRM1Q6IN84 353 aaKnown RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 QSOX2Q6ZRP7 698 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 CPEB2Q7Z5Q1 589 aaKnown RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 CLNKQ7Z7G1 428 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 CROCCP2Q86T23 111 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 SCUBE1Q8IWY4 988 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 MAGEB10Q96LZ2 347 aaPredicted RBP16.8■□□□□ 0.28
DDX55-204ENST00000536079 FER1L6-AS2Q96M78 137 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 PTCHD1Q96NR3 888 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 NUDT9Q9BW91 350 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 ACPTQ9BZG2 426 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 LYRM4Q9HD34 91 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 ATG4BQ9Y4P1 393 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 ASB4Q9Y574 426 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 PTGDR2Q9Y5Y4 395 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 SCN2AQ99250 2005 aa16.8■□□□□ 0.28
DDX55-204ENST00000536079 A0A088AWK7 358 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 TMEM233B4DJY2 109 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 PSMD12O00232 456 aaPredicted RBP16.79■□□□□ 0.28
DDX55-204ENST00000536079 PRMT3O60678 531 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 C1QL1O75973 258 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 SEMA3DO95025 777 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 HPP00738 406 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 KLK1P06870 262 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 ZNF10P21506 573 aaPredicted RBP16.79■□□□□ 0.28
DDX55-204ENST00000536079 TPP2P29144 1249 aaPredicted RBP16.79■□□□□ 0.28
DDX55-204ENST00000536079 HMOX2P30519 316 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 WDR4P57081 412 aaKnown RBP16.79■□□□□ 0.28
DDX55-204ENST00000536079 SFT2D3Q587I9 215 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 ARL13AQ5H913 290 aaPredicted RBP16.79■□□□□ 0.28
DDX55-204ENST00000536079 RIPOR1Q6ZS17 1223 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 NDUFAF7Q7L592 441 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 CUZD1Q86UP6 607 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 METTL4Q8N3J2 472 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 ZCCHC7Q8N3Z6 543 aaKnown RBP16.79■□□□□ 0.28
DDX55-204ENST00000536079 GALNT16Q8N428 558 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 CNDP1Q96KN2 507 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 IMMP1LQ96LU5 166 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 ROGDIQ9GZN7 287 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 BRF2Q9HAW0 419 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 ATP13A2Q9NQ11 1180 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 PRDM9Q9NQV7 894 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 TP53TG5Q9Y2B4 290 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 STK38LQ9Y2H1 464 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 NUP210LQ5VU65 1888 aa16.79■□□□□ 0.28
DDX55-204ENST00000536079 A0A1W2PR48 441 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ARHGAP10A1A4S6 786 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 A8MUA0 341 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ITM2AO43736 263 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 NPHS1O60500 1241 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ULK1O75385 1050 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 SASH3O75995 380 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 KRT6AP02538 564 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 KRT6BP04259 564 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 JAK1P23458 1154 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 KRT6CP48668 564 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 RRADP55042 308 aa16.78■□□□□ 0.28
DDX55-204ENST00000536079 ID2Q02363 134 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms