RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RNF111Q6ZNA4 994 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 RAB11FIP2Q7L804 512 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 OR5P2Q8WZ92 322 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 DAZLQ92904 295 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 OR1F2PQ96R84 312 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 POU2F3Q9UKI9 436 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 SLC35F4A4IF30 521 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 FCER2P06734 321 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 MPC1LP0DKB6 136 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 CD72P21854 359 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 KCNC1P48547 511 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 ASTE1Q2TB18 679 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 C12orf76Q8N812 135 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 THAP3Q8WTV1 239 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 MVB12BQ9H7P6 319 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 A0A1W2PQU0 124 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 DFNA5O60443 496 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 H2BFMP0C1H6 154 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 ZNF35P13682 527 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 GRIK2Q13002 908 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 ZNF648Q5T619 568 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 JPH3Q8WXH2 748 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 TTTY10Q9BZA0 68 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 MEAF6Q9HAF1 191 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 FTSJ1Q9UET6 329 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 TMPRSS11EQ9UL52 423 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 CDH10Q9Y6N8 788 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 NPY5RQ15761 445 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 GRK1Q15835 563 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 NKAPLQ5M9Q1 402 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 KCTD9Q7L273 389 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 TCEANCQ8N8B7 351 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 RDH8Q9NYR8 311 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 SLC7A11Q9UPY5 501 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 HEPACAM2A8MVW5 462 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 OXTRP30559 389 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 GRIA2P42262 883 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 C3P01024 1663 aa17.49■□□□□ 0.39
SFSWAP-203ENST00000535236 ZNF821O75541 412 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 LHCGRP22888 699 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 EDNRBP24530 442 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 TUBA3CQ13748 450 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 RABL3Q5HYI8 236 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 KIAA1614Q5VZ46 1190 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 GLT8D1Q68CQ7 371 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 DPY19L3Q6ZPD9 716 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 TTLL10Q6ZVT0 673 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 GID4Q8IVV7 300 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 PQLC3Q8N755 202 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 SCP2D1Q9UJQ7 156 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 CA14Q9ULX7 337 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 SH2B3Q9UQQ2 575 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 HRGP04196 525 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 OR12D1P0DN82 309 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 CSF2RAP15509 400 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 MAGEA2P43356 314 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ACADVLP49748 655 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 AGTR2P50052 363 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 SPATS1Q496A3 300 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 C7orf57Q8NEG2 295 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ABHD5Q8WTS1 349 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 DKK3Q9UBP4 350 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 SIX4Q9UIU6 781 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 SH3PXD2BA1X283 911 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ANXA3P12429 323 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 MLLT10P55197 1068 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 KCNC4Q03721 635 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ALG10BQ5I7T1 473 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 KCTD18Q6PI47 426 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 TIFABQ6ZNK6 161 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ZNF100Q8IYN0 542 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 DNAAF1Q8NEP3 725 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 NUP43Q8NFH3 380 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 PELOQ9BRX2 385 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 APOBEC3BQ9UH17 382 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 BACE2Q9Y5Z0 518 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 KLF11O14901 512 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ACRV1P26436 265 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 RBMS1P29558 406 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ABRAXAS2Q15018 415 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 ZBED5Q49AG3 693 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 CARD17Q5XLA6 110 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 OR8K3Q8NH51 312 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 TRIM43Q96BQ3 446 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 TAS2R10Q9NYW0 307 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 GSKIPQ9P0R6 139 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 MLXQ9UH92 298 aa17.48■□□□□ 0.39
SFSWAP-203ENST00000535236 GRXCR2A6NFK2 248 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 RAD51DO75771 328 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 DNAJB13P59910 316 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 ANKDD1AQ495B1 522 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 SLC2A11Q9BYW1 496 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 HHATLQ9HCP6 504 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 MTMR10Q9NXD2 777 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 FAM227AF5H4B4 570 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 M0R129 80 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 IFNA7P01567 189 aa17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 MRPL3P09001 348 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-203ENST00000535236 PRKACGP22612 351 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms