RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TAS2R14Q9NYV8 317 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GNPTGQ9UJJ9 305 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CFAP45Q9UL16 551 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 PLCL2Q9UPR0 1127 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 ICKQ9UPZ9 632 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 COLEC10Q9Y6Z7 277 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 DOCK10Q96BY6 2186 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 GTPBP10A4D1E9 387 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 WDR91A4D1P6 747 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MARCH11A6NNE9 402 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CXorf49A8MYA2 514 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 C2orf74A8MZ97 194 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ISM1B1AKI9 464 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 IDSB3KWA1 339 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 EIF3CLB5ME19 914 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 GPR89AB7ZAQ6 455 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SYT5O00445 386 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 GAPDHSO14556 408 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MGST3O14880 152 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DSCR3O14972 297 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 EPHB6O15197 1021 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PJA2O43164 708 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 RRP9O43818 475 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PEX1O43933 1283 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PRPSAP2O60256 369 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CTSVO60911 334 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PHF2O75151 1096 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DNAJB6O75190 326 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PROP1O75360 226 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 NEURL1O76050 574 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZFPL1O95159 310 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SCGB1D2O95969 90 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 STATHP02808 62 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 EIF2S1P05198 315 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 LPLP06858 475 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 HEXBP07686 556 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CHRM5P08912 532 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CD48P09326 243 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 GPR89BP0CG08 455 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PRSS56P0CW18 603 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF24P17028 368 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MAGP20916 626 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CTSSP25774 331 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 HSPA9P38646 679 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZFP36L2P47974 494 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 HCAR3P49019 387 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 RAB28P51157 221 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 LGALS4P56470 323 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 VSX2P58304 361 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CDR2Q01850 454 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 OC90Q02509 493 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC10A2Q12908 348 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MAMLD1Q13495 774 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CAPRIN1Q14444 709 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DAZAP2Q15038 168 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ACAP2Q15057 778 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 BRD3Q15059 726 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MINDY4Q4G0A6 757 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SHEQ5VZ18 495 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 TMEM211Q6ICI0 200 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 FRMPD2BQ6IN97 320 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DNAJC24Q6P3W2 148 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DCUN1D2Q6PH85 259 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CNSTQ6PJW8 725 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 TMCO3Q6UWJ1 677 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF788Q6ZQV5 615 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 LANCL3Q6ZV70 420 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 WDR53Q7Z5U6 358 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 HOOK3Q86VS8 718 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 GAS2L3Q86XJ1 694 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PHF13Q86YI8 300 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MIER2Q8N344 545 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 BBS5Q8N3I7 341 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 KIF2BQ8N4N8 673 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ATPAF2Q8N5M1 289 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC25A41Q8N5S1 370 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MSANTD4Q8NCY6 345 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 C3orf20Q8ND61 904 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ANKRD20A12PQ8NF67 263 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 OR2L2Q8NH16 312 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SPATA22Q8NHS9 363 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 NSMCE1Q8WV22 266 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DDB2Q92466 427 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 HSPH1Q92598 858 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SMARCE1Q969G3 411 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 FKBP10Q96AY3 582 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SCMH1Q96GD3 660 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CAPZA3Q96KX2 299 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 IL17FQ96PD4 163 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CSPG4P5Q96PW8 444 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 GSDMAQ96QA5 445 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 EIF3CQ99613 913 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PIGQQ9BRB3 760 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 UTP23Q9BRU9 249 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 TTYH2Q9BSA4 534 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZSCAN5AQ9BUG6 496 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 C19orf24Q9BVV8 132 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 STK33Q9BYT3 514 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 POLR1EQ9GZS1 481 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms