RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PPCSQ9HAB8 311 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 C14orf105Q9NVL8 296 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TMEM216Q9P0N5 145 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 HCN3Q9P1Z3 774 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 SH3BGRL2Q9UJC5 107 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 ZFP69BQ9UJL9 534 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TMCO1Q9UM00 188 aa8.2□□□□□ -1.1
COPB1-210ENST00000533533 TNPO3Q9Y5L0 923 aaKnown RBP8.2□□□□□ -1.1
COPB1-210ENST00000533533 LOC102723996A0A087X1L8 192 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 A0A0G2JN53 185 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 OR5H15A6NDH6 313 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 URADA6NGE7 173 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 SGK494L7N484 410 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 COPEO14579 308 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 FOXS1O43638 330 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 SLC19A2O60779 497 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 PRAMEF2O60811 474 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 GLRA3O75311 464 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 SH3BGRLO75368 114 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 RDH16O75452 317 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 B3GALT4O96024 378 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TUBBP07437 444 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 HEXBP07686 556 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 ZNF888P0CJ79 500 aaPredicted RBP8.19□□□□□ -1.1
COPB1-210ENST00000533533 ITGAMP11215 1152 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 ICAM2P13598 275 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 AHRP35869 848 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 CASP6P55212 293 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 RAB8AP61006 207 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 RBPJQ06330 500 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 LAPTM5Q13571 262 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 PWP1Q13610 501 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 PCOLCEQ15113 449 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 DEFB134Q4QY38 66 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 ABHD17BQ5VST6 288 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 FAAH2Q6GMR7 532 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TMEM214Q6NUQ4 689 aaKnown RBP8.19□□□□□ -1.1
COPB1-210ENST00000533533 ABHD13Q7L211 337 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 PRSS41Q7RTY9 318 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 GOLGA7Q7Z5G4 137 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TDRPQ86YL5 185 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 CNPY4Q8N129 248 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 AMER3Q8N944 861 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TTLQ8NG68 377 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 SUN3Q8TAQ9 357 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 ACMSDQ8TDX5 336 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 UBTD2Q8WUN7 234 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TM4SF19Q96DZ7 209 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 FAR2Q96K12 515 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 IMMP1LQ96LU5 166 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 EFCAB11Q9BUY7 163 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TGIF2Q9GZN2 237 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 IQCGQ9H095 443 aaKnown RBP8.19□□□□□ -1.1
COPB1-210ENST00000533533 ZNF700Q9H0M5 742 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 RHBGQ9H310 441 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 CENPHQ9H3R5 247 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 IPPKQ9H8X2 491 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 MKKSQ9NPJ1 570 aaPredicted RBP8.19□□□□□ -1.1
COPB1-210ENST00000533533 STMN3Q9NZ72 180 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 DCDC2Q9UHG0 476 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 TEKT2Q9UIF3 430 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 NAALAD2Q9Y3Q0 740 aa8.19□□□□□ -1.1
COPB1-210ENST00000533533 A8MT66 165 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 STX16-NPEPL1H3BU86 382 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 STX16O14662 325 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 PRAMEF4O60810 478 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ERLIN1O75477 346 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 WISP2O76076 250 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 SUPT7LO94864 414 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 NSA2O95478 260 aaKnown RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 GSTA1P08263 222 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 NUDT17P0C025 328 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 MYL2P10916 166 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ALOX12P18054 663 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 KRT4P19013 534 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 TSPAN8P19075 237 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 EPORP19235 508 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 AGAP20933 346 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 CCT5P48643 541 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 PIK3CGP48736 1102 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 CCNG1P51959 295 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 PLA2G16P53816 162 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 STXBP1P61764 594 aaKnown RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 SKP1P63208 163 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 OLR1P78380 273 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ADORA2A-AS1P86434 159 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 ZNF33BQ06732 778 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 FAM53BQ14153 422 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 HERC3Q15034 1050 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 PCBP2Q15366 365 aaKnown RBP eCLIP8.18□□□□□ -1.12e-11■■■■■ 33.8
COPB1-210ENST00000533533 CPSF6Q16630 551 aaKnown RBP eCLIP8.18□□□□□ -1.1
COPB1-210ENST00000533533 KRT71Q3SY84 523 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 MINDY4Q4G0A6 757 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 PRAMEF9Q5VWM5 478 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 TTC19Q6DKK2 380 aaPredicted RBP8.18□□□□□ -1.1
COPB1-210ENST00000533533 ADNP2Q6IQ32 1131 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 MED27Q6P2C8 311 aa8.18□□□□□ -1.1
COPB1-210ENST00000533533 TMEM205Q6UW68 189 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms