RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 CSNK2A2P19784 350 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 MATN1P21941 496 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 CLCN7P51798 805 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 NUDT6P53370 316 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 FOXK1P85037 733 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 EMX2Q04743 252 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 PUM1Q14671 1186 aaKnown RBP eCLIP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 RAB39AQ14964 217 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 MAPK14Q16539 360 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 FAM72AQ5TYM5 149 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 FAM72DQ6L9T8 149 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 ENPP7Q6UWV6 458 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 FAM72BQ86X60 149 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 PRSS58Q8IYP2 241 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 ZNF676Q8N7Q3 588 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 AQP11Q8NBQ7 271 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 SCRN2Q96FV2 425 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 PLAGL1Q9UM63 463 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 BAZ2AQ9UIF9 1905 aaKnown RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 A0A0D9SEW6 157 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 DUXAA6NLW8 204 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 ERI3O43414 337 aaKnown RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 TSPAN15O95858 294 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 RENP00797 406 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 PRKACGP22612 351 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 ADH6P28332 368 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 UGT2B10P36537 528 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 BLKP51451 505 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 RPS13P62277 151 aaKnown RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 GFOD2Q3B7J2 385 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 SPANXN4Q5MJ08 99 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 ZNF574Q6ZN55 896 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 PDZD9Q8IXQ8 264 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 CLDN19Q8N6F1 224 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 ENDOVQ8N8Q3 282 aaKnown RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 OTUB2Q96DC9 234 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 TMED9Q9BVK6 235 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 OR2B2Q9GZK3 357 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 POPDC3Q9HBV1 291 aa7.84□□□□□ -1.15
CTNND1-234ENST00000532844 SPATA6Q9NWH7 488 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-234ENST00000532844 KDM3BQ7LBC6 1761 aa7.84□□□□□ -1.16
CTNND1-234ENST00000532844 PHRF1Q9P1Y6 1649 aaKnown RBP7.84□□□□□ -1.16
CTNND1-234ENST00000532844 UPK3BL1B0FP48 263 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 UPK3BL2E5RIL1 263 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 GSTM2P28161 218 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 SLC11A1P49279 550 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 CDK6Q00534 326 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 TGFBIQ15582 683 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 ANKDD1AQ495B1 522 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 SPATS1Q496A3 300 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 WDR45BQ5MNZ6 344 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 LRRTM4Q86VH4 590 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 CEP97Q8IW35 865 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 NATD1Q8N6N6 113 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 OR56B2PQ8NGI1 322 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 TMEM203Q969S6 136 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 BORCS7Q96B45 105 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 OR2M4Q96R27 311 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 C11orf84Q9BUA3 381 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 NSUN3Q9H649 340 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 TMEM185BQ9H7F4 350 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 FBRSL1Q9HCM7 1045 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 PCDHGA8Q9Y5G5 932 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 MTMR11A4FU01 709 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 JUNP05412 331 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 ZNF30P17039 623 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 RBMXP38159 391 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 GNMTQ14749 295 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 CLCA4Q14CN2 919 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 PTCHD3Q3KNS1 767 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 WDTC1Q8N5D0 677 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 MFSD2AQ8NA29 543 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 LURAP1Q96LR2 239 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 ZNF578Q96N58 590 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 WACQ9BTA9 647 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 MYNNQ9NPC7 610 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 FBXL3Q9UKT7 428 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 OTOL1A6NHN0 477 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 A8MVJ9 347 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 FAM189A1O60320 539 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 SCGB2A1O75556 95 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 GBAP04062 536 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 CHRNB1P11230 501 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 PIM1P11309 404 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 ZNF674Q2M3X9 581 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 PDSS1Q5T2R2 415 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 PRPF38BQ5VTL8 546 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 C22orf39Q6P5X5 142 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 NCEH1Q6PIU2 408 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 ZNF773Q6PK81 442 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 CEACAM20Q6UY09 585 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 TPRG1Q6ZUI0 275 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 MARCH9Q86YJ5 346 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 RBM12BQ8IXT5 1001 aaKnown RBP7.83□□□□□ -1.16
CTNND1-234ENST00000532844 TMEM145Q8NBT3 493 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 SEZ6LQ9BYH1 1024 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 XYLT2Q9H1B5 865 aa7.83□□□□□ -1.16
CTNND1-234ENST00000532844 RPF2Q9H7B2 306 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms