RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	GABRA3	P34903	492 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	SELENOV	P59797	346 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	RING1	Q06587	406 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	SAMD11	Q96NU1	681 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	GABRQ	Q9UN88	632 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	HCRTR2	O43614	444 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF821	O75541	412 aa	Predicted RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	VNN2	O95498	520 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR12D1	P0DN82	309 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	C6orf136	Q5SQH8	315 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	WAC	Q9BTA9	647 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR6C74	A6NCV1	312 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	LSM1	O15116	133 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	XPNPEP2	O43895	674 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	LRIF1	Q5T3J3	769 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	DDX1	Q92499	740 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	IMP4	Q96G21	291 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	IRF2BPL	Q9H1B7	796 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	C11orf98	E9PRG8	122 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791		H3BSA7	217 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	SPARC	P09486	303 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	FAM72C	H0Y354	149 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	RNGTT	O60942	597 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	PDYN	P01213	254 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	IL3	P08700	152 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	CD83	Q01151	205 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	RPL6	Q02878	288 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	FAM72A	Q5TYM5	149 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	FAM72D	Q6L9T8	149 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	KBTBD6	Q86V97	674 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	FAM72B	Q86X60	149 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	BRF2	Q9HAW0	419 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	CD1D	P15813	335 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	LEPR	P48357	1165 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	KCNC1	P48547	511 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	OGFRL1	Q5TC84	451 aa	Predicted RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	MEDAG	Q5VYS4	303 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	SSX6	Q7RTT6	188 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	CARM1	Q86X55	608 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	GID4	Q8IVV7	300 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	SFXN1	Q9H9B4	322 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	GPR34	Q9UPC5	381 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZFR2	Q9UPR6	939 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	GPR89A	B7ZAQ6	455 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	DFNA5	O60443	496 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	GPR89B	P0CG08	455 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	CD9	P21926	228 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	EDNRB	P24530	442 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	DIO3	P55073	304 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	RAB15	P59190	212 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC25A25	Q6KCM7	469 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR51G2	Q8NGK0	314 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZUFSP	Q96AP4	578 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	PARPBP	Q9NWS1	579 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	TAS2R10	Q9NYW0	307 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	NKX1-2	Q9UD57	310 aa	Predicted RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	BPNT1	O95861	308 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	MRPL3	P09001	348 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	BCKDHA	P12694	445 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	DEFA5	Q01523	94 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	GINS1	Q14691	196 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF517	Q6ZMY9	492 aa	Predicted RBP	18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZSWIM9	Q86XI8	627 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC5A7	Q9GZV3	580 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	MLX	Q9UH92	298 aa		18.81	■□□□□ 0.6
FGFR1-238	ENST00000532791	PCP4L1	A6NKN8	68 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	NPIPA2	E9PIF3	369 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	NPIPA3	F8WFD2	350 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	FLRT2	O43155	660 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	HOXD13	P35453	343 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	PPP1R3A	Q16821	1122 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SHQ1	Q6PI26	577 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SUN5	Q8TC36	379 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF317	Q96PQ6	595 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC2A13	Q96QE2	648 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	BHMG1	C9JSJ3	638 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	PLD2	O14939	933 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	CSTA	P01040	98 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SMYD5	Q6GMV2	418 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	IGSF8	Q969P0	613 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	TRIB3	Q96RU7	358 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	RETREG1	Q9H6L5	497 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR5K4	A6NMS3	321 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SCO2	O43819	266 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	S1PR1	P21453	382 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	FBL	P22087	321 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF611	Q8N823	705 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC37A3	Q8NCC5	494 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	NUP43	Q8NFH3	380 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	JPH3	Q8WXH2	748 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	MRGPRX2	Q96LB1	330 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791		A0A096LPI6	279 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	NANOGP8	Q6NSW7	305 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	KCTD9	Q7L273	389 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	UMODL1-AS1	Q8N2C9	162 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	C7orf57	Q8NEG2	295 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR8K3	Q8NH51	312 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC30A2	Q9BRI3	323 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	GPR62	Q9BZJ7	368 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms