RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PDCD4Q53EL6 469 aaKnown RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SH3YL1Q96HL8 342 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-221ENST00000532331 PHF12Q96QT6 1004 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ZFYVE21Q9BQ24 234 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CRB3Q9BUF7 120 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 LGR4Q9BXB1 951 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 CD320Q9NPF0 282 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 SRPK3Q9UPE1 567 aa10.86□□□□□ -0.67
PTPRK-221ENST00000532331 ENDOUP21128 410 aaKnown RBP10.85□□□□□ -0.67
PTPRK-221ENST00000532331 YPEL5P62699 121 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 TUBB3Q13509 450 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ZNF678Q5SXM1 525 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 CEACAM20Q6UY09 585 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ASB15Q8WXK1 588 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PEX11GQ96HA9 241 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 FEZF1A0PJY2 475 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 E7ENX8 843 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PRKD3O94806 890 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 G6PDP11413 515 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 HSF2Q03933 536 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 MXD1Q05195 221 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 MOGSQ13724 837 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 SMU1Q2TAY7 513 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 TMEM35AQ53FP2 167 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 NXPE4Q6UWF7 544 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 LIPIQ6XZB0 460 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 SLC7A8Q9UHI5 535 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 POFUT2Q9Y2G5 429 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PDE4DIPQ5VU43 2346 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 A0A1W2PP18 115 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 DFNA5O60443 496 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 OPN1SWP03999 348 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 TACSTD2P09758 323 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 GBX2P52951 348 aaPredicted RBP10.85□□□□□ -0.67
PTPRK-221ENST00000532331 VBP1P61758 197 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 CD47Q08722 323 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 MERTKQ12866 999 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 CHMP1AQ9HD42 196 aaPredicted RBP10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ACTR10Q9NZ32 417 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 A0A0J9YY10 115 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ZNF99A8MXY4 864 aaPredicted RBP10.85□□□□□ -0.67
PTPRK-221ENST00000532331 FNTBP49356 437 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ARG2P78540 354 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 VLDLRP98155 873 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PCLAFQ15004 111 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ZNF630Q2M218 657 aaPredicted RBP10.85□□□□□ -0.67
PTPRK-221ENST00000532331 OR2T5Q6IEZ7 315 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 FRMD7Q6ZUT3 714 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 HSD11B1LQ7Z5J1 315 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 OR5T3Q8NGG3 340 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 OR2T29Q8NH02 315 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 NFKBIDQ8NI38 313 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 MYRFLQ96LU7 910 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 ASB16Q96NS5 453 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PRSS16Q9NQE7 514 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PTRH2Q9Y3E5 179 aaKnown RBP10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PCDHGB5Q9Y5G0 923 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 PCDHGB1Q9Y5G3 927 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 THSD7AQ9UPZ6 1657 aa10.85□□□□□ -0.67
PTPRK-221ENST00000532331 BRINP1O60477 761 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 RCBTB2O95199 551 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CSNK1DP48730 415 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 GDI2P50395 445 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 LASP1Q14847 261 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 MANEAQ5SRI9 462 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 GALNT12Q8IXK2 581 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CBARPQ8N350 705 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 KLHL36Q8N4N3 616 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 PRSS51A0A1B0GVH4 220 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SCO2O43819 266 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SCN1BQ07699 218 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 ABHD18Q0P651 414 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SYT16Q17RD7 645 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 NANOGNBQ7Z5D8 188 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 AGBL5Q8NDL9 886 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 OR2L5Q8NG80 312 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CANT1Q8WVQ1 401 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 POLR2J2Q9GZM3 115 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SEC61A2Q9H9S3 476 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 TPT1P8Q9HAU6 139 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 ZBTB26Q9HCK0 441 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 PHIPQ8WWQ0 1821 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 MYH8P13535 1937 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 C1orf226A1L170 272 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 A8MVJ9 347 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 WASH4PA8MWX3 477 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 TLR4O00206 839 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 GSK3BP49841 420 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 PRPF38BQ5VTL8 546 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 RELL1Q8IUW5 271 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 PACRGLQ8N7B6 248 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 PKP4Q99569 1192 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 HPF1Q9NWY4 346 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 RIMKLBQ9ULI2 386 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 NPPAP01160 153 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CD9P21926 228 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms