RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 WDR34Q96EX3 536 aa19.49■□□□□ 0.71
SMPD1-204ENST00000530395 ROGDIQ9GZN7 287 aa19.49■□□□□ 0.71
SMPD1-204ENST00000530395 PYCARDQ9ULZ3 195 aa19.49■□□□□ 0.71
SMPD1-204ENST00000530395 RAD51CO43502 376 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 CCNT2O60583 730 aaKnown RBP19.48■□□□□ 0.71
SMPD1-204ENST00000530395 ZFAND5O76080 213 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 TFEBP19484 476 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 KCNC1P48547 511 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 SSR4P51571 173 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 HNRNPFP52597 415 aaKnown RBP19.48■□□□□ 0.71
SMPD1-204ENST00000530395 LIM2P55344 173 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 IRF8Q02556 426 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 ELAVL1Q15717 326 aaKnown RBP19.48■□□□□ 0.71
SMPD1-204ENST00000530395 RNFT1Q5M7Z0 435 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 LRRC70Q7Z2Q7 622 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 GDF7Q7Z4P5 450 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 VN1R5Q7Z5H4 357 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 TMEM52Q8NDY8 209 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 SRFBP1Q8NEF9 429 aaKnown RBP19.48■□□□□ 0.71
SMPD1-204ENST00000530395 KIAA1191Q96A73 305 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 ESAMQ96AP7 390 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 UBXN10Q96LJ8 280 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 KCNC2Q96PR1 638 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 PHACTR1Q9C0D0 580 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 ZNF490Q9ULM2 529 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-204ENST00000530395 DAPP1Q9UN19 280 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 YARS2Q9Y2Z4 477 aaKnown RBP19.48■□□□□ 0.71
SMPD1-204ENST00000530395 CLCA3PQ9Y6N3 262 aa19.48■□□□□ 0.71
SMPD1-204ENST00000530395 TGFBR3LH3BV60 316 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 FANCGO15287 622 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 TBX6O95947 436 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-204ENST00000530395 IFNA16P05015 189 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 PPP2R1BP30154 601 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 HSF1Q00613 529 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 CAV1Q03135 178 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 CHIT1Q13231 466 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 BMPR2Q13873 1038 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 SLMAPQ14BN4 828 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 EFTUD2Q15029 972 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMPD1-204ENST00000530395 TBCCQ15814 346 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 GRTP1Q5TC63 336 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 ADNP2Q6IQ32 1131 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 RAPH1Q70E73 1250 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 CLNKQ7Z7G1 428 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 SULF2Q8IWU5 870 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 STAG3L4Q8TBR4 150 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 AGAP11Q8TF27 550 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 DAZLQ92904 295 aaKnown RBP19.47■□□□□ 0.71
SMPD1-204ENST00000530395 UBE2E3Q969T4 207 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 CD244Q9BZW8 370 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 TIMMDC1Q9NPL8 285 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 GRHL1Q9NZI5 618 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 NUDT4Q9NZJ9 180 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 ZNF223Q9UK11 482 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-204ENST00000530395 PTBP2Q9UKA9 531 aaKnown RBP19.47■□□□□ 0.71
SMPD1-204ENST00000530395 ERVK-11Q9UQG0 969 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 UTP11Q9Y3A2 253 aaKnown RBP19.47■□□□□ 0.71
SMPD1-204ENST00000530395 SPACA6W5XKT8 324 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 FBN2P35556 2912 aa19.47■□□□□ 0.71
SMPD1-204ENST00000530395 CYR61O00622 381 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 PEX1O43933 1283 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 PRAMEF4O60810 478 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 CTNSO60931 367 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 CLDN14O95500 239 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 MSH2P43246 934 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 C2orf54Q08AI8 447 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 STX4Q12846 297 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 PRAMEF9Q5VWM5 478 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 TBC1D1Q86TI0 1168 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-204ENST00000530395 CCDC25Q86WR0 208 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 GPALPP1Q8IXQ4 340 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 PPM1NQ8N819 430 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 OR14A16Q8NHC5 309 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 PHF10Q8WUB8 498 aaKnown RBP19.46■□□□□ 0.71
SMPD1-204ENST00000530395 F2RL3Q96RI0 385 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 CSF3RQ99062 836 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 RAB17Q9H0T7 212 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 ALG9Q9H6U8 611 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 LYRM4Q9HD34 91 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 CLDN16Q9Y5I7 305 aa19.46■□□□□ 0.71
SMPD1-204ENST00000530395 OTOGQ6ZRI0 2925 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 ADGRG4Q8IZF6 3080 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 A8MVJ9 347 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 E9PLN8 166 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 TUBB4AP04350 444 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 CD22P20273 847 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 STX2P32856 288 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 PTGER1P34995 402 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 GPR143P51810 404 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 PLTPP55058 493 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 GPX6P59796 221 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 KBTBD12Q3ZCT8 623 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 HSDL2Q6YN16 418 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 DOLPP1Q86YN1 238 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 MORN4Q8NDC4 146 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 ASB15Q8WXK1 588 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 MTFMTQ96DP5 389 aaKnown RBP19.45■□□□□ 0.7
SMPD1-204ENST00000530395 PHF12Q96QT6 1004 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 VKORC1Q9BQB6 163 aa19.45■□□□□ 0.7
SMPD1-204ENST00000530395 TBCDQ9BTW9 1192 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms