RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 RCN2Q14257 317 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 IRAK1BP1Q5VVH5 260 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 SRRM1Q8IYB3 904 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 APOPT1Q96IL0 206 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF382Q96SR6 550 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 SERPINI1Q99574 410 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 WDR77Q9BQA1 342 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 SORBS1Q9BX66 1292 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 GSTO2Q9H4Y5 243 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 OXSMQ9NWU1 459 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 SNX6Q9UNH7 406 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 STK38LQ9Y2H1 464 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 MMACHCQ9Y4U1 282 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 CFAP46Q8IYW2 2715 aa11.91□□□□□ -0.5
CCDC90B-216ENST00000529856 TCRBV16S1A1N1A0A5B0 115 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 CLDN4O14493 209 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 SEC24DO94855 1032 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 ALPPP05187 535 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 MAOAP21397 527 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 BSGP35613 385 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 SSR2P43308 183 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 HNRNPFP52597 415 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 PKNOX1P55347 436 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 HSD17B7P56937 341 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 OR4D2P58180 307 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 NAA20P61599 178 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 LCP2Q13094 533 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 SLAMF1Q13291 335 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 SFT2D3Q587I9 215 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 SGO1Q5FBB7 561 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 AGAP7PQ5VUJ5 663 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 RIPOR1Q6ZS17 1223 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 GPRIN3Q6ZVF9 776 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 SCUBE1Q8IWY4 988 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF595Q8IYB9 648 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 ZCCHC7Q8N3Z6 543 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 AMER2Q8N7J2 671 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 CCDC63Q8NA47 563 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 FAM47BQ8NA70 645 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 TEX19Q8NA77 164 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 TMEM52Q8NDY8 209 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 PSMF1Q92530 271 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 AGAP4Q96P64 663 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 CSF3RQ99062 836 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 MAPKAP1Q9BPZ7 522 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF717Q9BY31 904 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 IQCGQ9H095 443 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 ELOVL6Q9H5J4 265 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 DDX31Q9H8H2 851 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 FARSBQ9NSD9 589 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 MID2Q9UJV3 735 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 ANAPC2Q9UJX6 822 aa11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 MRPS33Q9Y291 106 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 HEMK1Q9Y5R4 338 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-216ENST00000529856 DPM1O60762 260 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 CTNSO60931 367 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 SPAG7O75391 227 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 SEMA3DO95025 777 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 PDYNP01213 254 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 CELA2AP08217 269 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 NAGLUP54802 743 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 AP2B1P63010 937 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 LIPMQ5VYY2 423 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 PLAG1Q6DJT9 500 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 JMJD6Q6NYC1 403 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 PAPD4Q6PIY7 484 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 IGFL2Q6UWQ7 119 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 IGFL3Q6UXB1 125 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 ZNF605Q86T29 641 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 RBMXL3Q8N7X1 1067 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 CDYL2Q8N8U2 506 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 ARMC2Q8NEN0 867 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 M1APQ8TC57 530 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 METTL6Q8TCB7 284 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 SELENOMQ8WWX9 145 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 ZIM3Q96PE6 472 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 LMF1Q96S06 567 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 SMC6Q96SB8 1091 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 LPAR4Q99677 370 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 SLC29A3Q9BZD2 475 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 BRF2Q9HAW0 419 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 ZBTB20Q9HC78 741 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 CLDN16Q9Y5I7 305 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 SPACA6W5XKT8 324 aa11.89□□□□□ -0.51
CCDC90B-216ENST00000529856 A0A0A6YYD5 115 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 BLACEA4D250 179 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 TGFBR3LH3BV60 316 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 MANBAO00462 879 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 UBFD1O14562 309 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ERLIN1O75477 346 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 EEDO75530 441 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 ESRRBO95718 433 aa11.88□□□□□ -0.51
CCDC90B-216ENST00000529856 KRT6AP02538 564 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms