RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ULK2Q8IYT8 1036 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 ANKRD53Q8N9V6 530 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 EEF1AKMT1Q8WVE0 214 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 KCNJ9Q92806 393 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 SMIM10Q96HG1 83 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 COX4I2Q96KJ9 171 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 SARGQ9BW04 601 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 SLC6A15Q9H2J7 730 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 INTS10Q9NVR2 710 aaKnown RBP17.53■□□□□ 0.4
SSRP1-204ENST00000529002 SAMD15Q9P1V8 674 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 KLHL42Q9P2K6 505 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 ZFP69BQ9UJL9 534 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 STAB1Q9NY15 2570 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 ZANQ9Y493 2812 aa17.53■□□□□ 0.4
SSRP1-204ENST00000529002 HEATR5AQ86XA9 2040 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 HSPB2A8KAH6 182 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 BTNL10A8MVZ5 291 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 PEX19P40855 299 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 TIAL1Q01085 375 aaKnown RBP eCLIP17.52■□□□□ 0.4
SSRP1-204ENST00000529002 TERF2Q15554 542 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 HSPB2Q16082 182 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 TOR1AIP1Q5JTV8 583 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 Q5PR19 223 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 RAD9BQ6WBX8 426 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 RTL4Q6ZR62 310 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 SNF8Q96H20 258 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 CALR3Q96L12 384 aaKnown RBP17.52■□□□□ 0.4
SSRP1-204ENST00000529002 CCDC68Q9H2F9 335 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 PRTFDC1Q9NRG1 225 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 ATG4BQ9Y4P1 393 aa17.52■□□□□ 0.4
SSRP1-204ENST00000529002 CLCA1A8K7I4 914 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 MIF4GDA9UHW6 222 aaKnown RBP17.51■□□□□ 0.39
SSRP1-204ENST00000529002 DVL2O14641 736 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 GABRA1P14867 456 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 TRPC1P48995 793 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 CHD3Q12873 2000 aaKnown RBP17.51■□□□□ 0.39
SSRP1-204ENST00000529002 FBXL19-AS1Q494R0 122 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 SHEQ5VZ18 495 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 SLC13A5Q86YT5 568 aaPredicted RBP17.51■□□□□ 0.39
SSRP1-204ENST00000529002 ZNF669Q96BR6 464 aaPredicted RBP17.51■□□□□ 0.39
SSRP1-204ENST00000529002 HES6Q96HZ4 224 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 TSNARE1Q96NA8 513 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 EPB41L4BQ9H329 900 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 PARVBQ9HBI1 364 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 SACM1LQ9NTJ5 587 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 BEX4Q9NWD9 120 aaPredicted RBP17.51■□□□□ 0.39
SSRP1-204ENST00000529002 MMACHCQ9Y4U1 282 aa17.51■□□□□ 0.39
SSRP1-204ENST00000529002 CLDN4O14493 209 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 NRDCO43847 1150 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 HAUS5O94927 633 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 HRGP04196 525 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 SLC1A2P43004 574 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 ZNF136P52737 540 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 PGGT1BP53609 377 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 BTN3A2P78410 334 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 DHX9Q08211 1270 aaKnown RBP17.5■□□□□ 0.39
SSRP1-204ENST00000529002 SLC13A2Q13183 592 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 BMPR2Q13873 1038 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 DHX34Q14147 1143 aaKnown RBP17.5■□□□□ 0.39
SSRP1-204ENST00000529002 HYAL4Q2M3T9 481 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 CASC4Q6P4E1 433 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 FAM47BQ8NA70 645 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 NEIL2Q969S2 332 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 Q96MF0 132 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 NDNQ99608 321 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 HAUS8Q9BT25 410 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 DSCAMO60469 2012 aa17.5■□□□□ 0.39
SSRP1-204ENST00000529002 SONP18583 2426 aaKnown RBP17.49■□□□□ 0.39
SSRP1-204ENST00000529002 FAM171A2A8MVW0 826 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 FAM47E-STBD1D6RA91 191 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 HCN1O60741 890 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 P04436 131 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 CCND1P24385 295 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 CEACAM8P31997 349 aaPredicted RBP17.49■□□□□ 0.39
SSRP1-204ENST00000529002 CCZ1BP86790 482 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
SSRP1-204ENST00000529002 NIPAL1Q6NVV3 410 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 ADGRD1Q6QNK2 874 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 HSDL2Q6YN16 418 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 STRA8Q7Z7C7 330 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 OR56A3Q8NH54 315 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 YIPF4Q9BSR8 244 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 ADAP2Q9NPF8 381 aa17.49■□□□□ 0.39
SSRP1-204ENST00000529002 MTRF1LQ9UGC7 380 aaKnown RBP17.49■□□□□ 0.39
SSRP1-204ENST00000529002 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.49■□□□□ 0.39
SSRP1-204ENST00000529002 TRIM64A6NGJ6 449 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 TRIM64BA6NI03 449 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 LRATO95237 230 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 IFNA16P05015 189 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 C8GP07360 202 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 SAT1P21673 171 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 AHRP35869 848 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 REEP5Q00765 189 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 CSHL1Q14406 222 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 RBBP5Q15291 538 aaKnown RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 SIX1Q15475 284 aaPredicted RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 ACSF3Q4G176 576 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms