RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 NOL4O94818 638 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ENDOD1O94919 500 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 GABARAPO95166 117 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SEC24AO95486 1093 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SCGB1D2O95969 90 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TOP3BO95985 862 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PGK1P00558 417 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 IFNA7P01567 189 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FTH1P02794 183 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SERPING1P05155 500 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CD1AP06126 327 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CHRM2P08172 466 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ACSM4P0C7M7 580 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF806P0C7X5 589 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 LINC00614P0C842 121 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TRIM49P0CI25 452 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TRIM49CP0CI26 452 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PRR23D2P0DMB1 279 aaPredicted RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ADORA3P0DMS8 318 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RALBP11234 206 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CYP19A1P11511 503 aaPredicted RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FCGR1AP12314 374 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FCER1AP12319 257 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RNH1P13489 461 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ADRB3P13945 408 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NDUFB7P17568 137 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KLRC1P26715 233 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 GIFP27352 417 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 G0S2P27469 103 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ADCYAP1R1P41586 468 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DPP6P42658 865 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MCAMP43121 646 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CRATP43155 626 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CRKLP46109 303 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NT5C2P49902 561 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KPNA2P52292 529 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 EPHB1P54762 984 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ARSFP54793 590 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NME5P56597 212 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PER3P56645 1201 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KCNK10P57789 538 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RPS7P62081 194 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MRPS22P82650 360 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TAP2Q03519 686 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 LIPEQ05469 1076 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PRKCZQ05513 592 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PRKCDQ05655 676 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC18A2Q05940 514 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ILF3Q12906 894 aaKnown RBP eCLIP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ILKQ13418 452 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 BFSP2Q13515 415 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 AQP6Q13520 282 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TFDP2Q14188 446 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 GPR68Q15743 365 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC18A3Q16572 532 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FSCN1Q16658 493 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SYT16Q17RD7 645 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ALG11Q2TAA5 492 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 COL28A1Q2UY09 1125 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF528Q3MIS6 628 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NHSL2Q5HYW2 709 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 OR2B11Q5JQS5 317 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PAGE2BQ5JRK9 111 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DNLZQ5SXM8 178 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 STXBP5Q5T5C0 1151 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TEDDM1Q5T9Z0 273 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KDM4DQ6B0I6 523 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM180AQ6UWF9 173 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ISLR2Q6UXK2 745 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DLEU7Q6UYE1 221 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF66Q6ZN08 573 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PRPF39Q86UA1 669 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MON1AQ86VX9 555 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PSTKQ8IV42 348 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 GID4Q8IVV7 300 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MCEMP1Q8IX19 187 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CCDC105Q8IYK2 499 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM199Q8N511 208 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 C10orf53Q8N6V4 93 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 WDSUB1Q8N9V3 476 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM47BQ8NA70 645 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 OR2L5Q8NG80 312 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 OR10J5Q8NHC4 309 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CEP76Q8TAP6 659 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CREB3L4Q8TEY5 395 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC22A17Q8WUG5 538 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DCAKDQ8WVC6 231 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC5A11Q8WWX8 675 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 STAMQ92783 540 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DDX17Q92841 729 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC5A5Q92911 643 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLCO2A1Q92959 643 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RIT1Q92963 219 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM125Q96AQ2 219 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RHBDF1Q96CC6 855 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NXNL1Q96CM4 212 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 REPS1Q96D71 796 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RAX2Q96IS3 184 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ZBED3Q96IU2 234 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms