RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 NLRP14Q86W24 1093 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 OR4N5Q8IXE1 308 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 SYCP3Q8IZU3 236 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 ELMOD1Q8N336 334 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 OR2L2Q8NH16 312 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 C8orf46Q8TAG6 207 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 GPR148Q8TDV2 347 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 LIPHQ8WWY8 451 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 CDKN2AIPNLQ96HQ2 116 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 ALKBH3Q96Q83 286 aaPredicted RBP3.47□□□□□ -1.85
CD44-215ENST00000525241 TAAR6Q96RI8 345 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 JPT2Q9H910 190 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 WDR41Q9HAD4 459 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 KCNK13Q9HB14 408 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 ZFP37Q9Y6Q3 630 aaPredicted RBP3.47□□□□□ -1.85
CD44-215ENST00000525241 NOTCH3Q9UM47 2321 aa3.47□□□□□ -1.85
CD44-215ENST00000525241 TRBV5-4A0A0C4DH59 114 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 PDHXO00330 501 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 TTI1O43156 1089 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ODC1P11926 461 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 SKILP12757 684 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 FOLR2P14207 255 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 CD1DP15813 335 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 OR1D2P34982 312 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 TNNT3P45378 269 aaPredicted RBP3.46□□□□□ -1.86
CD44-215ENST00000525241 SLC34A1Q06495 639 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ACKR1Q16570 336 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 RFTN2Q52LD8 501 aaPredicted RBP3.46□□□□□ -1.86
CD44-215ENST00000525241 LYPLAL1Q5VWZ2 237 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 SPINK14Q6IE38 97 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 NEPROQ6NW34 567 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 TMEM64Q6YI46 380 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 MCM10Q7L590 875 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 TIPARPQ7Z3E1 657 aaKnown RBP3.46□□□□□ -1.86
CD44-215ENST00000525241 ASPGQ86U10 573 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 CACUL1Q86Y37 369 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ERC1Q8IUD2 1116 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 CLYBLQ8N0X4 340 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 PANX3Q96QZ0 392 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 DESI2Q9BSY9 194 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 DCTN5Q9BTE1 182 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 TRIM7Q9C029 511 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ADNPQ9H2P0 1102 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ZNF665Q9H7R5 613 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 MOB1AQ9H8S9 216 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 PLEKHA3Q9HB20 300 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ABCB8Q9NUT2 735 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 CNIH4Q9P003 139 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 ZNF319Q9P2F9 582 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 SMAD5-AS1Q9Y6J3 95 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 STYXL1Q9Y6J8 313 aa3.46□□□□□ -1.86
CD44-215ENST00000525241 TDRD15B5MCY1 1934 aaKnown RBP3.45□□□□□ -1.86
CD44-215ENST00000525241 TRGV8A0A0C4DH27 118 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 B4GAT1O43505 415 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 OR6B1O95007 311 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 CALCAP01258 141 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 MUTP22033 750 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 LMO2P25791 158 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 RPL9P32969 192 aaKnown RBP3.45□□□□□ -1.86
CD44-215ENST00000525241 ZFP36L1Q07352 338 aaKnown RBP3.45□□□□□ -1.86
CD44-215ENST00000525241 RBBP4Q09028 425 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 CYP4V2Q6ZWL3 525 aaPredicted RBP3.45□□□□□ -1.86
CD44-215ENST00000525241 RPAINQ86UA6 219 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 CATSPER3Q86XQ3 398 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 CDC20BQ86Y33 519 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 CCDC83Q8IWF9 413 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 C4orf32Q8N8J7 132 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 OR6F1Q8NGZ6 308 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 ZNF274Q96GC6 653 aaPredicted RBP3.45□□□□□ -1.86
CD44-215ENST00000525241 TNFRSF13CQ96RJ3 184 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 ERGIC2Q96RQ1 377 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 UBAC1Q9BSL1 405 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 PUS3Q9BZE2 481 aaKnown RBP3.45□□□□□ -1.86
CD44-215ENST00000525241 STRADBQ9C0K7 418 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 S100A14Q9HCY8 104 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 THYN1Q9P016 225 aa3.45□□□□□ -1.86
CD44-215ENST00000525241 ACEP12821 1306 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 SALL1Q9NSC2 1324 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 A0A0A6YYC8 382 aaPredicted RBP3.44□□□□□ -1.86
CD44-215ENST00000525241 C13orf42A0A1B0GVH6 325 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 ATP6AP2A0A1C7CYW4 349 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 I3L1I5 382 aaPredicted RBP3.44□□□□□ -1.86
CD44-215ENST00000525241 SYT7O43581 403 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 GALR3O60755 368 aaPredicted RBP3.44□□□□□ -1.86
CD44-215ENST00000525241 SRSF10O75494 262 aaKnown RBP3.44□□□□□ -1.86
CD44-215ENST00000525241 CRCPO75575 148 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 PRDM1O75626 825 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 IGHG1P01857 330 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 BCL3P20749 454 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 SERPINB6P35237 376 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 PTGER3P43115 390 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 ZFP36L2P47974 494 aaKnown RBP3.44□□□□□ -1.86
CD44-215ENST00000525241 FHITP49789 147 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 GSK3BP49841 420 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 SNU13P55769 128 aaKnown RBP3.44□□□□□ -1.86
CD44-215ENST00000525241 SLMAPQ14BN4 828 aa3.44□□□□□ -1.86
CD44-215ENST00000525241 ZNF239Q16600 458 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms