RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MYPOPQ86VE0 399 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 PHF13Q86YI8 300 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 TMEM139Q8IV31 216 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SIX6OS1Q8N1H7 587 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 VWA5B2Q8N398 1253 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC44A3Q8N4M1 653 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 EIF4E3Q8N5X7 224 aaKnown RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 EMC1Q8N766 993 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 RBM15BQ8NDT2 890 aaKnown RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 PRSS33Q8NF86 280 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 OR2V1Q8NHB1 315 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 C9orf43Q8TAL5 461 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 STOML3Q8TAV4 291 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 EDARADDQ8WWZ3 215 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 FGF13Q92913 245 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 MRGPRFQ96AM1 343 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 KIAA1143Q96AT1 154 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 AP2M1Q96CW1 435 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC7A6OSQ96CW6 309 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 KIF12Q96FN5 646 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 MYADMQ96S97 322 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 PFDN5Q99471 154 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SEPT5Q99719 369 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NPAS1Q99742 590 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 MSTO1Q9BUK6 570 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 TPPP3Q9BW30 176 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 GPR63Q9BZJ6 419 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NMUR2Q9GZQ4 415 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NEUROG2Q9H2A3 272 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SEMA6CQ9H3T2 930 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 EVA1AQ9H8M9 152 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 POLR1BQ9H9Y6 1135 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 HMG20AQ9NP66 347 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 DPP3Q9NY33 737 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 CDH22Q9UJ99 828 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 MYRFQ9Y2G1 1151 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 MRPS17Q9Y2R5 130 aaKnown RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 KCNIP3Q9Y2W7 256 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 GOLT1BQ9Y3E0 138 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 MAB21L2Q9Y586 359 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 POMT1Q9Y6A1 747 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SAR1BQ9Y6B6 198 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF638Q14966 1978 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SCN1AP35498 2009 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 FAM186AA6NE01 2351 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SLC5A10A0PJK1 596 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 LNP1A1A4G5 178 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MEX3AA1L020 520 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 WDR27A2RRH5 827 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MPTX1A8MV57 137 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 KRBOX1C9JBD0 128 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CCL16O15467 120 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PRODHO43272 600 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 HRO43593 1189 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 DEAF1O75398 565 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 NDST3O95803 873 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PDGFBP01127 241 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PPBPP02775 128 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF18P17022 549 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 GM2AP17900 193 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ZP3P21754 424 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MSR1P21757 451 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 NR4A1P22736 598 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 IL12AP29459 219 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ECHS1P30084 290 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SDHAP31040 664 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 THBS4P35443 961 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 RBP2P50120 134 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CCR4P51679 360 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MAPK10P53779 464 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 KIAA1024LP59773 190 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 RBX1P62877 108 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SEMG2Q02383 582 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 NHLH2Q02577 135 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 TCF15Q12870 199 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ITGADQ13349 1161 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MRPL49Q13405 166 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ILKQ13418 452 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 GRB7Q14451 532 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MTF1Q14872 753 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 TMEM132DQ14C87 1099 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 LLGL1Q15334 1064 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SF1Q15637 639 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ZBTB6Q15916 424 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PDK4Q16654 411 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MEP1BQ16820 701 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ZFP69Q49AA0 526 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CDNFQ49AH0 187 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MPPE1Q53F39 396 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PAN3Q58A45 887 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 NKAIN2Q5VXU1 208 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 OGFOD2Q6N063 350 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ADGRD1Q6QNK2 874 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MFSD7Q6UXD7 560 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms