RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 BPHLQ86WA6 291 aaPredicted RBP12.38□□□□□ -0.43
CPNE3-205ENST00000522240 GPR135Q8IZ08 494 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 AGBL5Q8NDL9 886 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 OR1L3Q8NH93 324 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 CDC26Q8NHZ8 85 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 NETO1Q8TDF5 533 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 SPDL1Q96EA4 605 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 MVB12AQ96EY5 273 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 EGLN2Q96KS0 407 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 FAIM2Q9BWQ8 316 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 REEP4Q9H6H4 257 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 ANKHQ9HCJ1 492 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 LYRM4Q9HD34 91 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 IRAK4Q9NWZ3 460 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 TOR4AQ9NXH8 423 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 ATP6V1HQ9UI12 483 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 SERTAD3Q9UJW9 196 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 SRPK3Q9UPE1 567 aa12.38□□□□□ -0.43
CPNE3-205ENST00000522240 MRPS2Q9Y399 296 aaKnown RBP12.38□□□□□ -0.43
CPNE3-205ENST00000522240 A0A1W2PP18 115 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 HYKKA2RU49 373 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 ERICH4A6NGS2 130 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 CCDC154A6NI56 674 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 DKK1O94907 266 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 CTSBP07858 339 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 IL3P08700 152 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 FURINP09958 794 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 DRD2P14416 443 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 IL1RNP18510 177 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 DDCP20711 480 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 CSRP1P21291 193 aaKnown RBP12.37□□□□□ -0.43
CPNE3-205ENST00000522240 RASSF2P50749 326 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 ARSFP54793 590 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 HNRNPH2P55795 449 aaKnown RBP12.37□□□□□ -0.43
CPNE3-205ENST00000522240 INSM1Q01101 510 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-205ENST00000522240 SRSF11Q05519 484 aaKnown RBP12.37□□□□□ -0.43
CPNE3-205ENST00000522240 SLAMF1Q13291 335 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 UGT8Q16880 541 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 CDCP2Q5VXM1 449 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 B3GNT8Q7Z7M8 397 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 KRTCAP2Q8N6L1 136 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 POU5F2Q8N7G0 328 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 AMER3Q8N944 861 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 RCBTB1Q8NDN9 531 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 OR8J2Q8NGG1 315 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 ADAMTS18Q8TE60 1221 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 TM4SF18Q96CE8 201 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 SLC45A3Q96JT2 553 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
CPNE3-205ENST00000522240 SLC52A3Q9NQ40 469 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 ATAD3AQ9NVI7 634 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 MS4A12Q9NXJ0 267 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 EHD3Q9NZN3 535 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
CPNE3-205ENST00000522240 NDUFAF1Q9Y375 327 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 CACNA1GO43497 2377 aa12.37□□□□□ -0.43
CPNE3-205ENST00000522240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 H0YIG0 161 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 SLC30A4O14863 429 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 ANGPT2O15123 496 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 LRATO95237 230 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 PGRP06401 933 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 ADRB1P08588 477 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 COX7A2P14406 83 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 BUD31P41223 144 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 KIR3DL1P43629 444 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 AVPR1BP47901 424 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 SNRPNP63162 240 aaKnown RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 TNFRSF17Q02223 184 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 C2orf80Q0P641 193 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 LRRC74AQ0VAA2 488 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 C16orf72Q14CZ0 275 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 TRIP6Q15654 476 aaKnown RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 SPRED3Q2MJR0 410 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 FAM174BQ3ZCQ3 159 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 TIGD2Q4W5G0 525 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 SPANXN4Q5MJ08 99 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 REP15Q6BDI9 236 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 PRSS41Q7RTY9 318 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 GPR180Q86V85 440 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 PDSS2Q86YH6 399 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 ANKK1Q8NFD2 765 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 LIN37Q96GY3 246 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 BHLHE41Q9C0J9 482 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 SPRTNQ9H040 489 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 MIEF1Q9NQG6 463 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 STARD5Q9NSY2 213 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 FAM120CQ9NX05 1096 aaKnown RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 TEX10Q9NXF1 929 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 AKAP7Q9P0M2 348 aaPredicted RBP12.36□□□□□ -0.43
CPNE3-205ENST00000522240 RARRES3Q9UL19 164 aa12.36□□□□□ -0.43
CPNE3-205ENST00000522240 DAPP1Q9UN19 280 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms