RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 THAP11Q96EK4 314 aa24.52■■□□□ 1.52
COL13A1-213ENST00000520267 CAMK1GQ96NX5 476 aa24.52■■□□□ 1.52
COL13A1-213ENST00000520267 ZNF300Q96RE9 604 aaPredicted RBP24.52■■□□□ 1.52
COL13A1-213ENST00000520267 ZNF347Q96SE7 839 aa24.52■■□□□ 1.52
COL13A1-213ENST00000520267 RHNO1Q9BSD3 238 aa24.52■■□□□ 1.52
COL13A1-213ENST00000520267 DUSP21Q9H596 190 aa24.52■■□□□ 1.52
COL13A1-213ENST00000520267 PRAMEF33A0A0G2JMD5 474 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 TMPRSS11DO60235 418 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 PRAMEF10O60809 474 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 DSTNP60981 165 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 NPTX1Q15818 432 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 UBE3DQ7Z6J8 389 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 SMYD1Q8NB12 490 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 OR4C15Q8NGM1 316 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 OR52J3Q8NH60 311 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 GANCQ8TET4 914 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 RAB2BQ8WUD1 216 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 FEVQ99581 238 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 CDCA3Q99618 268 aaPredicted RBP24.51■■□□□ 1.51
COL13A1-213ENST00000520267 FUNDC2Q9BWH2 189 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 LMAN2LQ9H0V9 348 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 SLC6A17Q9H1V8 727 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 RASSF1Q9NS23 344 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 WARS2Q9UGM6 360 aaKnown RBP24.51■■□□□ 1.51
COL13A1-213ENST00000520267 TPRKBQ9Y3C4 175 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 IGKV1-8A0A0C4DH67 115 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 J3KTA2 159 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 K7EQS6 105 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 NDUFS4O43181 175 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 CEACAM5P06731 702 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 ZNF182P17025 639 aaPredicted RBP24.51■■□□□ 1.51
COL13A1-213ENST00000520267 HTR1BP28222 390 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 CD6P30203 668 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 KIR2DL1P43626 348 aaPredicted RBP24.51■■□□□ 1.51
COL13A1-213ENST00000520267 ENTPD1P49961 510 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 CXCR4P61073 352 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 RPS26P62854 115 aaKnown RBP24.51■■□□□ 1.51
COL13A1-213ENST00000520267 SLC35A2P78381 396 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 SPIBQ01892 262 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 ZNF776Q68DI1 518 aaPredicted RBP24.51■■□□□ 1.51
COL13A1-213ENST00000520267 KIAA1161Q6NSJ0 714 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 AMER3Q8N944 861 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 FAR1Q8WVX9 515 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 OR5P2Q8WZ92 322 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 TANKQ92844 425 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 UCN3Q969E3 161 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 KCNC2Q96PR1 638 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 C1QTNF2Q9BXJ5 285 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 GABARAPL3Q9BY60 117 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 NKX2-4Q9H2Z4 354 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 THSD1Q9NS62 852 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 FBXL12Q9NXK8 326 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 ANGPT4Q9Y264 503 aa24.51■■□□□ 1.51
COL13A1-213ENST00000520267 KLHL33A6NCF5 533 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 TBX19O60806 448 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 MANFP55145 182 aaKnown RBP24.5■■□□□ 1.51
COL13A1-213ENST00000520267 CDH12P55289 794 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 SGCGQ13326 291 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 CLCA4Q14CN2 919 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 HEPACAMQ14CZ8 416 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 Q6ZPB1 254 aaPredicted RBP24.5■■□□□ 1.51
COL13A1-213ENST00000520267 ADCK2Q7Z695 626 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 SLC5A8Q8N695 610 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 ELSPBP1Q96BH3 223 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 MKRN2Q9H000 416 aaKnown RBP24.5■■□□□ 1.51
COL13A1-213ENST00000520267 RLIMQ9NVW2 624 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 RAB23Q9ULC3 237 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 PCDHGB1Q9Y5G3 927 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 PDPK1O15530 556 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 SERPINB1P30740 379 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 SAXO2Q658L1 398 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 GPR153Q6NV75 609 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 HORMAD2Q8N7B1 307 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 TBC1D15Q8TC07 691 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 RGMAQ96B86 450 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 GPN2Q9H9Y4 310 aaPredicted RBP24.5■■□□□ 1.51
COL13A1-213ENST00000520267 TEX10Q9NXF1 929 aaPredicted RBP24.5■■□□□ 1.51
COL13A1-213ENST00000520267 SCN3BQ9NY72 215 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 MOSPD1Q9UJG1 213 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 PCDHGA10Q9Y5H3 936 aa24.5■■□□□ 1.51
COL13A1-213ENST00000520267 A0A0G2JN53 185 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 A0A1W2PQU0 124 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 ZNF99A8MXY4 864 aaPredicted RBP24.49■■□□□ 1.51
COL13A1-213ENST00000520267 PPM1DO15297 605 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 MAN1A2O60476 641 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 MAP2K4P45985 399 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 RPS21P63220 83 aaKnown RBP24.49■■□□□ 1.51
COL13A1-213ENST00000520267 BNIP3Q12983 259 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 EXOC3L2Q2M3D2 409 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 ANKRD54Q6NXT1 300 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 CEACAM20Q6UY09 585 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 NUDT13Q86X67 352 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 FAM20CQ8IXL6 584 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 RAB42Q8N4Z0 105 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 OR10G2Q8NGC3 310 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 OR2A1Q8NGT9 310 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 OR14C36Q8NHC7 312 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 TIMM29Q9BSF4 260 aa24.49■■□□□ 1.51
COL13A1-213ENST00000520267 PITHD1Q9GZP4 211 aaPredicted RBP24.49■■□□□ 1.51
COL13A1-213ENST00000520267 BTBD1Q9H0C5 482 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms