RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SERINC2Q96SA4 455 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 WWOXQ9NZC7 414 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 FBXW2Q9UKT8 454 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 DAPP1Q9UN19 280 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF407Q9C0G0 2248 aa11.59□□□□□ -0.55
CSMD1-205ENST00000519623 EML6Q6ZMW3 1958 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 A0A088AWK7 358 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 KLRC4-KLRK1H3BQV0 150 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 C19orf84I3L1E1 186 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 PEX1O43933 1283 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ITGA10O75578 1167 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 FAM155BO75949 473 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ZFAND5O76080 213 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ABOP16442 354 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 STMN1P16949 149 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ZNF10P21506 573 aaPredicted RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CERS1P27544 350 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 PTGER1P34995 402 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 GP5P40197 560 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 MEOX1P50221 254 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 MTTPP55157 894 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 RAB10P61026 200 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 DLG1Q12959 904 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CALCOCO2Q13137 446 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 SLC13A2Q13183 592 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 TBCCQ15814 346 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 PDK4Q16654 411 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 TRIM40Q6P9F5 258 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 C16orf47Q6ZP98 133 aaPredicted RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 MAATS1Q7Z4T9 603 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CLNKQ7Z7G1 428 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ISCA2Q86U28 154 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CYP4Z2PQ8N1L4 340 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 TMEM156Q8N614 296 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 SNX31Q8N9S9 440 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 FAM47BQ8NA70 645 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ZFP62Q8NB50 900 aaPredicted RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 AGAP11Q8TF27 550 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 PTPMT1Q8WUK0 201 aaPredicted RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 DMRTA2Q96SC8 542 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CSF3RQ99062 836 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 EFCAB11Q9BUY7 163 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CD244Q9BZW8 370 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 ADAP2Q9NPF8 381 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 CD274Q9NZQ7 290 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 TXNDC16Q9P2K2 825 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 VTI1BQ9UEU0 232 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 KLF13Q9Y2Y9 288 aaPredicted RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 YARS2Q9Y2Z4 477 aaKnown RBP11.58□□□□□ -0.56
CSMD1-205ENST00000519623 HRH3Q9Y5N1 445 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
CSMD1-205ENST00000519623 TEP1Q99973 2627 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 TACC2O95359 2948 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 MYOCOSA0A1B0GUC4 107 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 E9PLN8 166 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 CLDN14O95500 239 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 SNRPB2P08579 225 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 GSTA2P09210 222 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 TFEBP19484 476 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 HPDP32754 393 aaPredicted RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 SPRP35270 261 aaPredicted RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 PTGER4P35408 488 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 RFC3P40938 356 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 KIR3DL1P43629 444 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 IRF8Q02556 426 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 PCDH1Q08174 1060 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 CHIT1Q13231 466 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 LAPTM5Q13571 262 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 NAA30Q147X3 362 aaPredicted RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 EFTUD2Q15029 972 aaKnown RBP eCLIP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 TRADDQ15628 312 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 ELAVL1Q15717 326 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 KBTBD12Q3ZCT8 623 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 GRTP1Q5TC63 336 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 C3P1Q6ZMU1 363 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 ZNF793Q6ZN11 406 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 ZNF295-AS1Q8N0V1 137 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 TMEM132CQ8N3T6 1108 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 ZNF473Q8WTR7 871 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 PHF10Q8WUB8 498 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 MTFMTQ96DP5 389 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 VKORC1Q9BQB6 163 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 CCDC77Q9BR77 488 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 MS4A8Q9BY19 250 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 ALOXE3Q9BYJ1 711 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 LYRM4Q9HD34 91 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 DEPPQ9NTK1 212 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 RNF112Q9ULX5 631 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 MRPS33Q9Y291 106 aaKnown RBP11.57□□□□□ -0.56
CSMD1-205ENST00000519623 OTOGQ6ZRI0 2925 aa11.57□□□□□ -0.56
CSMD1-205ENST00000519623 POLQO75417 2590 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 A0A1B0GTH9 108 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 PRRG2O14669 202 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 HS6ST1O60243 411 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 CCNT2O60583 730 aaKnown RBP11.56□□□□□ -0.56
CSMD1-205ENST00000519623 OR2J2O76002 312 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 SLC35E2BP0CK96 405 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 COX6B1P14854 86 aa11.56□□□□□ -0.56
CSMD1-205ENST00000519623 ATP5A1P25705 553 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms