RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SIGLEC12Q96PQ1 595 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 SERINC2Q96SA4 455 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 FMO2Q99518 471 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 EFCAB11Q9BUY7 163 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 MS4A8Q9BY19 250 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 VPS11Q9H270 941 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 PRTFDC1Q9NRG1 225 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 OPTCQ9UBM4 332 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 DAPP1Q9UN19 280 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 MYO18BQ8IUG5 2567 aa8.75□□□□□ -1.01
HDAC3-215ENST00000519474 SYCE1LA8MT33 242 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 POC1B-GALNT4F8VUJ3 575 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 KIF2AO00139 706 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 PSMD12O00232 456 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 RTCAO00442 366 aaKnown RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 E2F3O00716 465 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 CLDN4O14493 209 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 B3GALT2O43825 422 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 PRAMEF2O60811 474 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 CTNSO60931 367 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 SH3BGRLO75368 114 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 E2F6O75461 281 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 AGFG2O95081 481 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 SIX3O95343 332 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 FAM153BP0C7A2 387 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 EPB42P16452 691 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ATP5A1P25705 553 aaKnown RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 MST1P26927 711 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 GCAP28676 217 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 MSH2P43246 934 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ALDH18A1P54886 795 aaKnown RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 HSD17B7P56937 341 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 TUBA3CQ13748 450 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 NAA30Q147X3 362 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 KRT72Q14CN4 511 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 FAM153CQ494X1 144 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 PAGE2BQ5JRK9 111 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF468Q5VIY5 522 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 LIPJQ5W064 366 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 TRIM40Q6P9F5 258 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 TUBA3EQ6PEY2 450 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF793Q6ZN11 406 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 CHSY3Q70JA7 882 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 RPS19BP1Q86WX3 136 aaKnown RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF227Q86WZ6 799 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 SCUBE1Q8IWY4 988 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ARMC10Q8N2F6 343 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 CEP112Q8N8E3 955 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ACOT4Q8N9L9 421 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 DRAXINQ8NBI3 349 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 APCDD1LQ8NCL9 501 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 MDS2Q8NDY4 140 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 SSC4DQ8WTU2 575 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 PAFAH2Q99487 392 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 MAPKAP1Q9BPZ7 522 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 TBCDQ9BTW9 1192 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 BRINP2Q9C0B6 783 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 OR51B5Q9H339 312 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 PNO1Q9NRX1 252 aaKnown RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 QPCTLQ9NXS2 382 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 TEKT2Q9UIF3 430 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ERRFI1Q9UJM3 462 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 NFU1Q9UMS0 254 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 RNF11Q9Y3C5 154 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 TSC22D4Q9Y3Q8 395 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 MMACHCQ9Y4U1 282 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 PCDHGB6Q9Y5F9 930 aa8.74□□□□□ -1.01
HDAC3-215ENST00000519474 DOPEY2Q9Y3R5 2298 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SAGE2PA6NJ88 616 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 WASHC1A8K0Z3 465 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TRIM49D1C9J1S8 452 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 RASAL1O95294 804 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 DDAH2O95865 285 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 INHBAP08476 426 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 RBP1P09455 135 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SBK3P0C264 359 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 MYBL2P10244 700 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 PCNAP12004 261 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 GP1BBP13224 206 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 EDN3P14138 238 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 CERS1P27544 350 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 PPP2R1BP30154 601 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SERPINB8P50452 374 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SERPINB9P50453 376 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TDGF1P3P51864 188 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 MLF1P58340 268 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 GTF2H2Q13888 395 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TMEM35AQ53FP2 167 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF766Q5HY98 468 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TECRLQ5HYJ1 363 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 OR4C11Q6IEV9 310 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 GRHL2Q6ISB3 625 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 GTF2H2CQ6P1K8 395 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TIFABQ6ZNK6 161 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF595Q8IYB9 648 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 BCORP1Q8N888 145 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 L3MBTL4Q8NA19 623 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SRFBP1Q8NEF9 429 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms